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SCNpilot_expt_500_p_scaffold_3531_1

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3..602

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI00036DBDF3 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 217.0
  • Bit_score: 236
  • Evalue 2.70e-59
Type I secretion protein {ECO:0000313|EMBL:KHN66388.1}; Flags: Fragment;; TaxID=1148157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter oleivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 213.0
  • Bit_score: 229
  • Evalue 4.70e-57
putative adhesin for cattle intestine colonization similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 217.0
  • Bit_score: 195
  • Evalue 1.30e-47

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Taxonomy

Acinetobacter oleivorans → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GGTGGCGGCGGCACAGTGATGGTGTCCGGCGTCAAGGCCTGGAGCAATACCGGCGGCCTGGACATCGTCGACTACAAGCTCGCAGGCGACACGCCGCTCACTATCGACTTGAGCAAAACCGGTGCGCAGAACACCGGTTTCGGCACGGCGACCTTCAGGAACATCGAGGGCCTGGCAGGTGGCCACAGCGCCGACATCTTTGTCGACAACGCGGCGGACAACCAGTTCGAAGGGCGTGGCGGCAACGACAACTTGATCCTCACAGGCGGGGGAAGGGACACGCTGCTCTACAAGCTGCTGGCAGCCAGTGACGCCACCGGCGGCAACGGTTCGGACGACGTCTACGCGTTCGAGGTCGGCGCATTCGCGGCCTGGCCCAACGCGGACCGTATCGACGTGCGCGAACTGCTGGTCGGCTTCACGCCGGCCAACGAAGCCAGCTACCTGAAGGTCTCGGTGGTCAACGGGCGCGACACGGTGATCTCCGTCGATCGCGATGGTGCTGACGGCGGCTTCGACTTCGCCCCGTTGCTGACCTTGCGCGGCGTGCAGACGGACCTGGCCACATTGCTCGCCAACCAGCAACTGGTGATGGTCTGA
PROTEIN sequence
Length: 200
GGGGTVMVSGVKAWSNTGGLDIVDYKLAGDTPLTIDLSKTGAQNTGFGTATFRNIEGLAGGHSADIFVDNAADNQFEGRGGNDNLILTGGGRDTLLYKLLAASDATGGNGSDDVYAFEVGAFAAWPNADRIDVRELLVGFTPANEASYLKVSVVNGRDTVISVDRDGADGGFDFAPLLTLRGVQTDLATLLANQQLVMV*