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SCNpilot_expt_500_p_scaffold_3531_6

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6786..7064

Top 3 Functional Annotations

Value Algorithm Source
Flagellar transcriptional regulator FlhD n=1 Tax=Variovorax paradoxus B4 RepID=T1XEN7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 87
  • Evalue 5.60e-15
putative flagellar transcriptional activator FlhD similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 87
  • Evalue 1.80e-15
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 87
  • Evalue 7.90e-15

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGACTCTTGAAAACCTGAGTGGTGTAGACAGCACGTTGCACAAAGAAATTGGCGACTTCAACCTGACGTACATGCTTCTGGCGCAGAAACTGGTGAAAGAGGATGGCGCGGTGGCCATGAGCCGCCTGGGCATCAGCAAAGATCTGGCGGCGCTCCTCTCCAACATGTCGTCCGCGCAGATCGTCAAGCTCGCTGAAACGAACCTGATGCTTTGCAGCTTCAGCCTGGAGAGCGCGACGCTCGCGTCCGTGAGAGACATTCACTCAACCAGGAACTGA
PROTEIN sequence
Length: 93
MTLENLSGVDSTLHKEIGDFNLTYMLLAQKLVKEDGAVAMSRLGISKDLAALLSNMSSAQIVKLAETNLMLCSFSLESATLASVRDIHSTRN*