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SCNpilot_expt_500_p_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_576_1
Xenopus laevis, Xenopus, Anura, Amphibia, Chordata, Metazoa

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3..239
DNA (237bp) protein (79aa)
Elongation factor 1-alpha, somatic form n=1 Tax=Xenopus laevis RepID=EF1A0_XENLA
eef1a1, EF-1-ALPHA-S, eef1a-s, eef1as; eukaryotic translation elongation factor 1 alpha 1; K03231 elongation factor 1-alpha
Elongation factor 1-alpha, somatic form; Short=EF-1-alpha-S;; TaxID=8355 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.;" source="Xenopus laevis (African clawed frog).;"
SCNpilot_expt_500_p_scaffold_576_2
unknown

Not on your lists

571..1125
DNA (555bp) protein (185aa)
uncoordinated
SCNpilot_expt_500_p_scaffold_576_3
unknown

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1135..1875
DNA (741bp) protein (247aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_4
unknown

Not on your lists

2197..2394
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_5
unknown

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2602..2880
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_6
Cavia porcellus, Cavia, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

3055..3279
DNA (225bp) protein (75aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=10141 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricognathi; Caviidae; Cavia.;" source="Cavia porcellus (Guinea pig).;"
Sod1, CuZnSOD; superoxide dismutase 1, soluble (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Cavia porcellus RepID=H0VQJ2_CAVPO
SCNpilot_expt_500_p_scaffold_576_7
Oxytricha trifallax, Oxytricha, Sporadotrichida, Stichotrichia, Eukaryota

Not on your lists

3666..4160
DNA (495bp) protein (165aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1172189 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.;" source="Oxytricha trifallax.;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Oxytricha trifallax RepID=J9J141_9SPIT
SCNpilot_expt_500_p_scaffold_576_8
unknown

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4426..4671
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_9
unknown

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comp(4690..4824)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_10
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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5358..5966
DNA (609bp) protein (203aa)
PREDICTED: tRNA wybutosine-synthesizing protein 3 homolog n=1 Tax=Amphimedon queenslandica RepID=UPI00021A58A9
tRNA wybutosine-synthesizing protein 3 homolog
tRNA wybutosine-synthesizing protein 3-like protein {ECO:0000313|EMBL:EKC20039.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_p_scaffold_576_11
unknown

Not on your lists

9895..10806
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_12
unknown

Not on your lists

11041..11304
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_13
unknown

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comp(11759..12439)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_14
unknown

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comp(13451..14170)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_15
unknown

Not on your lists

comp(14828..15079)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_16
unknown

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comp(16686..16862)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_17
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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comp(16972..17922)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Oryzias latipes RepID=H2M6T3_ORYLA
Lst7p {ECO:0000313|EMBL:EXX75713.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
hypothetical protein ; K09594 folliculin
SCNpilot_expt_500_p_scaffold_576_18
unknown

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comp(18165..18347)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_19
unknown

Not on your lists

comp(18581..19153)
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_20
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(19187..19495)
DNA (309bp) protein (103aa)
PREDICTED: transmembrane protein 168-A-like n=1 Tax=Aplysia californica RepID=UPI000359C6FA
Uncharacterized protein {ECO:0000313|EMBL:EKC19586.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
similar to Flj13576-prov protein
SCNpilot_expt_500_p_scaffold_576_21
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(19623..20828)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Crassostrea gigas RepID=K1QDN8_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:EKC19586.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
TMEM168, MGC152038; transmembrane protein 168
SCNpilot_expt_500_p_scaffold_576_22
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(20920..22038)
DNA (1119bp) protein (373aa)
Vitamin D3 receptor n=1 Tax=Crassostrea gigas RepID=K1R5L0_CRAGI
Vitamin D3 receptor {ECO:0000313|EMBL:EKC36490.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
nuclear receptor nhr-48, putative
SCNpilot_expt_500_p_scaffold_576_23
unknown

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22420..22590
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_24
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(23885..24910)
DNA (1026bp) protein (342aa)
PREDICTED: neuropeptides capa receptor-like n=1 Tax=Bombus terrestris RepID=UPI00021A6E73
thyrotropin-releasing hormone receptor-like
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI008027-PA}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_p_scaffold_576_25
unknown

Not on your lists

26580..26915
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_26
unknown

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comp(26934..27197)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_27
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(27256..28053)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3J3R6_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_021158-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
similar to nicotinic acetylcholine receptor alpha 8b subunit
SCNpilot_expt_500_p_scaffold_576_28
Pristionchus pacificus, Pristionchus, Diplogasterida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(28114..28542)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Pristionchus pacificus RepID=H3EFA0_PRIPA
Transmembrane ion channel {ECO:0000313|EMBL:KKA73013.1}; TaxID=54126 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Diplogasterida; Neodiplogasteridae; Pristionchus.;" source="Pristionchus pacificus (Parasitic nematode).;"
lgc-25; Ligand-Gated ion Channel family member (lgc-25)
SCNpilot_expt_500_p_scaffold_576_29
unknown

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29157..29291
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_576_30
unknown

Not on your lists

30569..30796
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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