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SCNpilot_expt_500_p_scaffold_41672_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 15 / 55 BSCG 19 / 51 ASCG 5 / 38 MC: 1
Location: comp(146..1237)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B43356 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 375.0
  • Bit_score: 327
  • Evalue 1.60e-86
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EXJ51380.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 363.0
  • Bit_score: 714
  • Evalue 6.70e-203
RNA polymerase sigma (70) factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 351.0
  • Bit_score: 275
  • Evalue 2.30e-71

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGACGAGTTGACGCTGCTGCGCAACACGCGTAGCGAGACCGAACCGCCGGAGTCGACGTTGCACCGGGGCAGGGCGGCGCTCCTGGCCGCAGCCTCCGGCTCCGCCCAGCCGCACATCAGCACGTCGCGCCGACCGAGACGCGCCCGACGCTTTGCGATCGGCGGACTCAGTACGGTCGGCGCCGCGGCACTGGTGGCGGGGCTCGTGCTGACGGACGTGGTCGGCCTCGCTGGCTGGCGTGGTGGGGCGGATGCCGCTGCCGCCGCCGTGCTCGACGAGGCGAGCGCCGCCGCGATCACCTCAGTCGATCCCGCGGTGCAGCCCGGCCAGTATCTGAGGGTCAACACCAGGGGCGTACACCTCTCAAGCGGAGGTATCGGTGATGTTGTGGCGTCGTACCAGTACGCGTCCGATGACACTCTCTACCGCCCCGCAGATCCCTCCGATGACTGGGTGTGGGTCCGCGGTCCGCAATCCATCGCGGCGACATTCGGTCCGGAGTCCGAGCAGGTGGCGAACGCGTGGTGGGAAGCCGTGTCCTCCTCGTCAGGTTCATTCGAGGCTGGGGATCTTCTCCGGGCACCTGGGGGCGCGTTCTACGGGGGTGACGCCGGGGCGGGGTTTGCCGATCTGGACCAGCTTCCGCGTGACCCGTATCGACTGCTCAACTACATCTACCGTGTCACCCTCGGCTCCGGTCCGTCGCCCGACACCGAGGCTCTCGTGTACATGGCCGACCGTCTCCGTGCCGGGAACGTGCCCGCCGACCTGCGCGCCGCGATGTACAAGGCTGCGGCCATGATCCCGGGCGTCACGTTCATCAGCGATCAAGCTACCCTTGACGGCCGCACGGGGGTCGCGATCGGCCGCGTGGAGGACGCGTGGGGCACCCGGGTGGACATCATCATCGACCCCGATACCGGCACGTTCATCGGCGATCGCGAGGTCCTCCTCCGCGACCAGGACGGCGTACCGGCGGGCACGGCGGTGCGCTGGACGAGCGTCACCTCCTCGGTCGTCGACGAGGCGCCCGAGGGCGGATCGGTGTGCGGGAAGATGACCGTCAACCCGGACACCGGGCAATGCTGA
PROTEIN sequence
Length: 364
MDELTLLRNTRSETEPPESTLHRGRAALLAAASGSAQPHISTSRRPRRARRFAIGGLSTVGAAALVAGLVLTDVVGLAGWRGGADAAAAAVLDEASAAAITSVDPAVQPGQYLRVNTRGVHLSSGGIGDVVASYQYASDDTLYRPADPSDDWVWVRGPQSIAATFGPESEQVANAWWEAVSSSSGSFEAGDLLRAPGGAFYGGDAGAGFADLDQLPRDPYRLLNYIYRVTLGSGPSPDTEALVYMADRLRAGNVPADLRAAMYKAAAMIPGVTFISDQATLDGRTGVAIGRVEDAWGTRVDIIIDPDTGTFIGDREVLLRDQDGVPAGTAVRWTSVTSSVVDEAPEGGSVCGKMTVNPDTGQC*