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SCNpilot_expt_500_p_scaffold_6097_5

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(2518..3204)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=2 Tax=Afipia RepID=D6V1E0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 228.0
  • Bit_score: 418
  • Evalue 3.40e-114
  • rbh
Transcriptional regulatory protein WalR {ECO:0000313|EMBL:CEG10090.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 228.0
  • Bit_score: 418
  • Evalue 4.80e-114
two-component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 228.0
  • Bit_score: 414
  • Evalue 2.00e-113
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGCCAACGCCCGCAAGATCCTGATCGTGGATGACGACAATGATCTGCGCGACGCTCTGATGGAGCAATTGTCGCTTCATGAGGAGTTCGAACCACTGGCCGCCGAAAACGGCGCCAAGGGAATGCTGGCCGCGAAGACTCATTCGCCGGACCTGGTGCTGATGGATGTCGGGCTGCCGGATACCGACGGCCGCGAAGCGGTGCGCAGCCTGCGCAAGAACGGCTTCAAGGCTCCGATCATCATGCTGACCGGCCACGACACCGAATCCGATACCATCCTCGGCCTGGAATCGGGCGCCAACGACTATGTGGCCAAGCCGTTCCGCTTCGCGGTGCTGCTGGCGCGGATCCGCGCCCAGTTGCGCCAGCACGAGGCCAGCGAGGACGCGGTGTTCTCGGTCGGCCCCTACAGCTTCCGGCCCGGCTCCAAGATGCTGACCGGGGCGAATGCCAAGAAGGTCCGCCTCACCGAGAAGGAGACCGCGATCCTGCGCTTCCTCTACCGCGCCGGCCAGCAGCCGGTGACGCGGGAAACCCTGCTGCAGGAAGTATGGGGCTACAATTCCGGGGTCACCACCCATACGCTGGAGACCCATATCTACCGGCTGCGCCAGAAGATCGAAAAGGACGCCGCCGGCCCCGAAATCCTGGTGACCGAATCGGGCGGCTACAAGCTCGTCCCATGA
PROTEIN sequence
Length: 229
MANARKILIVDDDNDLRDALMEQLSLHEEFEPLAAENGAKGMLAAKTHSPDLVLMDVGLPDTDGREAVRSLRKNGFKAPIIMLTGHDTESDTILGLESGANDYVAKPFRFAVLLARIRAQLRQHEASEDAVFSVGPYSFRPGSKMLTGANAKKVRLTEKETAILRFLYRAGQQPVTRETLLQEVWGYNSGVTTHTLETHIYRLRQKIEKDAAGPEILVTESGGYKLVP*