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SCNpilot_expt_500_p_scaffold_29155_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(704..1669)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AL76_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 184.0
  • Bit_score: 106
  • Evalue 6.90e-20
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 184.0
  • Bit_score: 106
  • Evalue 2.20e-20
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEF88521.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 184.0
  • Bit_score: 106
  • Evalue 9.70e-20

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGCCAAAATTTCATTTTACGTCGGATCAGTTGCCGTCCGCCCTTCCGGCGCGCATGCGCGCGAAGCTGTGGACGAACTCGATGGATGCGATCGGCTCCTCTTTCGAAATGGGGATCGTCACCAGCCGGAAGTTTCACGGCGAAGTGTCCGTCCTGCAGCTCGGCAGAATTCAGCTTGGCTCGGCAAAAACCCTCGCGGATGGCGCGGTCAATGTGCTGCGTTCCGAAGCAAGACTCCGTCAGGATGCCGACGACCGCATCATGATCGTCATCAACCGCGGCGAGACACCGATGATTGTCCGCCAGTTCGACCGCGAAACCGAACTGCAACGCGACGAGATGACGGTGCTTGCGATGGATATGCCGAGCGAATGCTCGACGCCCCAAAGCGGCCACTCGCATGTCATCCTCTTGCCGCGCGAAATCCTGCAGCAACCCGGACGCATGCTCGAGCTGTTTTCTGCGACGCGCCTGAAGACCCACCGCACCGTTCAGCTCCTGCTCAGTCAGAATGTGCAGCAACTGCTCTGCACCGAAGAGGGTCTCGATCCGTCTCTGGAAATCGCGTCAGGCGAATATATCGTCCACCTCGTCAGCACCATTCTGCAGACGCAAGGTTCGCAATCCGCAAAGCCGCAGACCGGGCGCGGTGCGCGCATCGCGGATATCCGCAAGCAGATCGCGCGCAACTATCGCATTCCCGATCTCAACCCCGAAGCGATCGGCGAACGGCTGGGCATGTCCGCGCGATCGATCCAGCACGCCTTGAGTCAGCACGGTTCGACCTTCAGCAAGGAACTGATGGGAATGAGACTGGAAGCTGCGTTTGGAATGCTCCGAAGCGGCGCGCCCCACCCGATCGCCGACATCGCGTTCAAATGCGGGTTTTCCGACCTCTCGACGTTCTACCGCGCGTTCCGGATGCGGTACGGCAAGACTCCGAATGCCTCGCGGGTGACGAAGTAA
PROTEIN sequence
Length: 322
MPKFHFTSDQLPSALPARMRAKLWTNSMDAIGSSFEMGIVTSRKFHGEVSVLQLGRIQLGSAKTLADGAVNVLRSEARLRQDADDRIMIVINRGETPMIVRQFDRETELQRDEMTVLAMDMPSECSTPQSGHSHVILLPREILQQPGRMLELFSATRLKTHRTVQLLLSQNVQQLLCTEEGLDPSLEIASGEYIVHLVSTILQTQGSQSAKPQTGRGARIADIRKQIARNYRIPDLNPEAIGERLGMSARSIQHALSQHGSTFSKELMGMRLEAAFGMLRSGAPHPIADIAFKCGFSDLSTFYRAFRMRYGKTPNASRVTK*