ggKbase home page

SCNpilot_expt_500_p_scaffold_15139_3

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1654..2670

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q1W5_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 330.0
  • Bit_score: 399
  • Evalue 4.20e-108
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 330.0
  • Bit_score: 399
  • Evalue 1.30e-108
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADX44096.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 330.0
  • Bit_score: 399
  • Evalue 5.80e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAATTTTCGCACCCTCGACCTCAACTTGCTGCGCGTCTTCGACGAGATTATGGCCGAGCGCAACATCACCCGGGCCGCCGCCAACCTGGCCATGACGCAGCCCGCCGTCAGCAACGCCCTGAAACGGCTGCGCGAGGCGCTGGGCGACGAGCTGGTGGTGCGCTCCGGCTACGGGGTCGAACCGACCCCCACGGCGCTCTCGCTGTGGCCCTCGGTGCGCGAGGCCCTCGCGCGGCTGCGCGCGGCCTTCACGCCGTCGTCCTTCGTGCCGGCCGAGGCCCAGGTGACCTTCAACCTGGCCATGGCCGATGCCACCGCTTCGCTGCTGATCCCGCCGCTGGTGGCCATCATCGAGCGCGAGGCGCCGGGGGTCACGCTGCGCGTGCTGCCACTGACCACGCGCGATCCACGCCACCTCCTGGCCACGCAGGACATCGACATCGCCGTGGGCCACCTGCCGAATGCGATCTCGGCAGTGTCCATCGAGGAGATGGACCCCGATGCCACGCCCGAATTCGGCCATCGACGCCTGTACAGCAGCCACTACGCCTGCGTGATGCGGCGCGACCACCCGCTCGCCGCGCAGGAGCTCACCCTCGATGCCTACTGCGCAGCCCACCACCTGCTGGTGAGCGTATCGGGACGACCCTATGGCAACATCGACGAGACCCTGGCGGCGATGGGACGCTCGCGGCGCATCGTGCTGACAGTCAACCAGTTCTTCACCGCCGGCATCGTGGTGGCGAACTCCGACCTGCTGACCGTCCTGCCGCGACATTTCCTGGCATCGACCGGCACCACCAACAAGGTTGCGGTGCGCCCCTTGCCGATGGAGCTGCCGCGGGTGGACGTCGAGGCGCTGTGGCTGCGCCGGCGCGCCAGCCGCCCTGGGCACGAGTGGCTGCGCGCCTCGATCGCTCGCGCAGCCGCCGCGCCGCTGCGCGAGCGCACGCCCGGCGCGAGCCCGCCGCCCCTGCCCAGCGAGCCCGACGCGCTCGAAGGCACGCTCGCGTGA
PROTEIN sequence
Length: 339
MNFRTLDLNLLRVFDEIMAERNITRAAANLAMTQPAVSNALKRLREALGDELVVRSGYGVEPTPTALSLWPSVREALARLRAAFTPSSFVPAEAQVTFNLAMADATASLLIPPLVAIIEREAPGVTLRVLPLTTRDPRHLLATQDIDIAVGHLPNAISAVSIEEMDPDATPEFGHRRLYSSHYACVMRRDHPLAAQELTLDAYCAAHHLLVSVSGRPYGNIDETLAAMGRSRRIVLTVNQFFTAGIVVANSDLLTVLPRHFLASTGTTNKVAVRPLPMELPRVDVEALWLRRRASRPGHEWLRASIARAAAAPLRERTPGASPPPLPSEPDALEGTLA*