ggKbase home page

SCNpilot_expt_500_p_scaffold_15207_5

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2215..3213)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 332.0
  • Bit_score: 563
  • Evalue 1.80e-157
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 332.0
  • Bit_score: 562
  • Evalue 8.80e-158
isopropylmalate isomerase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000381FFAB similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 332.0
  • Bit_score: 570
  • Evalue 1.30e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
GGCGCGTTCGGCTGCCTGGCCTTCGGCATCGGCACCTCCGAGGTCGAGCACGTGCTCGCCACGCAGACGCTGGTGGCGCGGAAGATGAAGAACATGCTGGTGCAGGTCGACGGCGCGCTGCCGGCCGGCGTCACCGCCAAGGACGTGGTGCTCGCCATCATCGGGCGCATCGGCACGGCGGGCGGCACCGGCTACGCCATCGAGTTCGGCGGCTCGACCATCCGCGCGCTGTCGATGGAAGGCCGCATGACCATCTGCAACATGGCCATCGAGGCGGGTGCGCGCGCCGGCATGATCGCGGTCGACGACACCACGCTGGGCTATCTGCGCGGGCGGCCGATGGCGCCGGCCGGTCTCGACTGGTACAAGGCGGTCGACCACTGGCGCACGCTGCGCTCCGATCCGCAGGCGCGTTTCGATCTGGTCGTCGAGCTCGATGCCACGCAGCTCAAGCCCCACGTCACCTGGGGTACCTCGCCCGAGATGGTGGTGGCGGTGGACGGGCGCGTGCCCGACCCCGACAAGGAAAAGGATCCGGTGCGCCGGGAAGGCATGGAGCGCGCCCTGCAGTACATGGGGCTCAAGCCCGATACGCCGATCACCGACATCCGCATCGACAAGGTGTTCATCGGCTCCTGCACCAACGCGCGCATCGAGGACCTGCGCGCGGCCGCGGCCGTGGTGCGCGGCAAGCACCGGGCCTCCAACGTGCGCCTGGCGATGGTCGTGCCGGGCTCGGGGCTGGTGAAGGCGCAGGCGGAGAAGGAAGGGCTCGACCGCATCTTCCGCGACGCCGGTTTCGAGTGGCGCGAGCCGGGGTGCTCGATGTGCCTGGCGATGAATGCCGACCGCCTCGAGCCGGGCGAGCGCTGCGCGTCGACCTCTAACCGCAATTTCGAGGGGCGCCAGGGCACCGGCGGGCGCACCCACCTGGTCAGTCCGGCGATGGCGGCTGCCGCGGCCGTCGCGGGGCATTTCGTCGACGTGCGGCGCATCTGA
PROTEIN sequence
Length: 333
GAFGCLAFGIGTSEVEHVLATQTLVARKMKNMLVQVDGALPAGVTAKDVVLAIIGRIGTAGGTGYAIEFGGSTIRALSMEGRMTICNMAIEAGARAGMIAVDDTTLGYLRGRPMAPAGLDWYKAVDHWRTLRSDPQARFDLVVELDATQLKPHVTWGTSPEMVVAVDGRVPDPDKEKDPVRREGMERALQYMGLKPDTPITDIRIDKVFIGSCTNARIEDLRAAAAVVRGKHRASNVRLAMVVPGSGLVKAQAEKEGLDRIFRDAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGTGGRTHLVSPAMAAAAAVAGHFVDVRRI*