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SCNpilot_expt_500_p_scaffold_28851_2

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1527..1841

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma-54 specific transcriptional regulator id=5081118 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 105.0
  • Bit_score: 201
  • Evalue 3.00e-49
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 105.0
  • Bit_score: 160
  • Evalue 2.40e-37
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 105.0
  • Bit_score: 201
  • Evalue 4.20e-49

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGACATCCATCCTGTTGATCGAAGACGACCCCATCATGGGTGAATCGCTGCTGCAGCGTTTCGAACTGGAGGGCTTGCAGGTGAGCTGGTGCCGGCGGATCAGCGAGGCGCGCGACGCATTCGCCGTCCTGCCGTCGGCCGTGGTCAGCGATGTCCGGCTGCCCGACGGTCTGGCCACCGAATGGTTCGTGGGTTTGCCCGCAACCGTCAGGGCCTTACCATGGTTCTTTCTCACGGGTTATGGCAGCGTCAACGATGCGGTCGCGGCGGTCCGTGCCGGCGCCCGGGAGTACCTGACCAAGCCTTTCGATATC
PROTEIN sequence
Length: 105
MTSILLIEDDPIMGESLLQRFELEGLQVSWCRRISEARDAFAVLPSAVVSDVRLPDGLATEWFVGLPATVRALPWFFLTGYGSVNDAVAAVRAGAREYLTKPFDI