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SCNpilot_expt_500_p_scaffold_18571_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1607..2731

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 376.0
  • Bit_score: 601
  • Evalue 6.50e-169
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 375.0
  • Bit_score: 589
  • Evalue 9.80e-166
ribonuclease R n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003696778 similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 376.0
  • Bit_score: 602
  • Evalue 2.70e-169

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
TTGAGCAAAGCGCGCGACAGCGGATTTCCCAACCGTGATGCCATCGTCGCGTTCATTCGCGCGCATCCCGGCGAAATCGGCACGCGCGACATCGCGCGCGAGTTCGGCCTGAAGAATGCCGACCGCGCCGAACTGAAACGCCTTCTGCGCACGTTGGCCGACGAAGGCATCATCGAGAAACGCGGCAAGACGATCCATCAGGCTGCCGCGCTTCCGCCGACGGTGATGGCCGACGTCACGCGCCGCGATCGCGACGGTGAGTTACTGGCGACGCCGACCGAATGGGATGAGGAACAGGGCGACGCGCCGAGCATCCGCATCCGCCTGCCGCGCTATCCCAAGCCGGGAACGGCGGCTGGCGTTGGCGATCGCGCACTGCTGCGCATCGAGCAAATCGATGGTGACGACGGCACAACCTATATCGGCCGCGTCATCAAGATCATCGACCACACCCGCTCGCGTGTGCTCGGCATCTTCCGCGCCCTGCCCACTGGCGGCGGACGCTTGGTGCCCGTCGACAAGAAGCAGGCCGGACGCGAACTGAATATCGCAAAGCCCGACACCGCCGGTGCCGAGGATGGCGATCTGGTCAGCGTCGAACTGATACGGTCGCGCGGTTTCGGCCTCGCCTCCGGCAAAGTGAAAGAGCGCCTTGGCTCGCTGGCGACGGAAAAGGCCATCAGCCTGATCGCCATTCACGCCCACGATATTCCGCAGGCGTTTTCATCGACGGCGATCAAGGAGGCCGAGGCCGCCAGGCCCGCGACCTTGCAGGGCCGCGAGGATTGGCGCGATGTGCCGCTCGTCACCATCGATCCGCCGGATGCGAAGGATCACGACGACGCGGTGCATGCCGAGCCCGACGCCAATCCCGATAACATGGGCGGCTACATTCTCCATGTCGCGATCGCCGATGTCGCGTTCTACGTGCGGCCGGGTTCGGGACTCGACCGCGATGCGCTGCTGCGCGGCAATTCGGTGTACTTCCCCGATCGCGTCGTGCCGATGCTGCCGGAGCGCATCTCCAACGATCTGTGCTCGCTGAAGCCCGGCGAACCGCGCGGCGCGCTGGCCGTGCGCATGGTGATCGGACCGGATGGGCGCAAGCGCTCGCACACATTCCAT
PROTEIN sequence
Length: 375
LSKARDSGFPNRDAIVAFIRAHPGEIGTRDIAREFGLKNADRAELKRLLRTLADEGIIEKRGKTIHQAAALPPTVMADVTRRDRDGELLATPTEWDEEQGDAPSIRIRLPRYPKPGTAAGVGDRALLRIEQIDGDDGTTYIGRVIKIIDHTRSRVLGIFRALPTGGGRLVPVDKKQAGRELNIAKPDTAGAEDGDLVSVELIRSRGFGLASGKVKERLGSLATEKAISLIAIHAHDIPQAFSSTAIKEAEAARPATLQGREDWRDVPLVTIDPPDAKDHDDAVHAEPDANPDNMGGYILHVAIADVAFYVRPGSGLDRDALLRGNSVYFPDRVVPMLPERISNDLCSLKPGEPRGALAVRMVIGPDGRKRSHTFH