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SCNpilot_expt_500_p_scaffold_27079_4

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(1670..1951)

Top 3 Functional Annotations

Value Algorithm Source
Cation diffusion facilitator family transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCV0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 93.0
  • Bit_score: 135
  • Evalue 2.40e-29
Cation transporter {ECO:0000313|EMBL:KIZ44774.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 188
  • Evalue 4.30e-45
czcD1; cobalt-zinc-cadmium resistance protein CzcD; K03295 cation efflux system protein, CDF family similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 93.0
  • Bit_score: 128
  • Evalue 1.60e-27

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATCCTTATGGAAGGCACGCCTCCGGACGTCGATCTCGGTCTTCTCGAGCGCCAACTATCGACCATCGAAGGTGTGAAGACGGTCCACGATCTCCACGTCTGGACGATTACGTCCGGCTTCGACGCCATGAGCTGCCACCTGGTGGTTAACGACATGTCGGTCGCCAGTACGATTCTGCAGGAAGCCCGCCGCCGCATGAAGGACGGTTTCAAGATCGACCATGTCACAATTCAGATCGAGGACGAGGCGTTACGCAACGAGGAAGGCGTGCTGCATGTCTAA
PROTEIN sequence
Length: 94
ILMEGTPPDVDLGLLERQLSTIEGVKTVHDLHVWTITSGFDAMSCHLVVNDMSVASTILQEARRRMKDGFKIDHVTIQIEDEALRNEEGVLHV*