ggKbase home page

SCNpilot_expt_500_p_scaffold_32333_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(217..1167)

Top 3 Functional Annotations

Value Algorithm Source
Auxin Efflux Carrier n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QIV0_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 316.0
  • Bit_score: 482
  • Evalue 2.70e-133
  • rbh
Malonate transporter {ECO:0000313|EMBL:KIZ45497.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 316.0
  • Bit_score: 506
  • Evalue 3.20e-140
auxin efflux carrier; K07088 similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 316.0
  • Bit_score: 482
  • Evalue 8.40e-134
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGATCGATGTTCTCAACCTTGCGATGCCGTATTTCGGCTTGATCTTCGTCGGATACGTTTGTGGAAAATGGCGGAACCTGCCGGAATCCGGGCTCGCCTGGATGAATTTCTTCGTGCTTTACGTCTCTCTTCCGGCGCTATTTTTCCGCATTATGTCGCGGACCCCGTTCGAGGAACTCGCCAATCCGCCGTTCGTGATCGCCACCACCGCGGCAACGGCTGCGGCTTTCTTCCTGTCTGCCATCGTCGGCAAATTGATCGGGCGGCTACCGCTTCGCGAAGCGGCGATGGCCGGGCTGGCCGGCGGTTACGGCAACATCGGCTACATGGGGCCGGCGCTGGCCTTGGCCCTGTTCGGTCTGCCATCGGCGGTGCCGACCGCGCTGATTTTCTGCTTCGACAGTATCTTCCTGTTTTCGGTGATTCCATTGTGGATGGCGCTGACCGATGGAACACGCCGGCCGCTACTGCCGACGCTGTGGTTCGTCGTCAAGGAGATCGTGCTGCATCCGCTGATCGTCGCCGTTTATTGCGGAGCGTTGGCGGCTGCGTTTCACCTGCAGCTGCCGGTGGCGCTCGACAGCATGTTGCAGTTCCTGCAAAGCTCGGCGGCGCCGGTCGCACTGTTCGTACTCGGCGTTACCGTCGCGCTGCGGCCGTTGGGGCGCGTGCCGTGGGAAATTCCCGGTCTCGTGCTGATCAAGCTTGTGATCCATCCGATACTGGTGTTCGCGCTGGTGTGGTGGCTCGGACCGTTCACGCCGGAATGGTCGGCCACGGCCGTGTTGATGGCGTCGCTGCCGCCAGCGTTGAACGTGTTCGTCATCGCCCGGCAGTATGACACCTGGACCGAACCTGCGTCGGTTGCGGTTCTGATCGGGACGTTCGTGTCGGTGGTGACGTTGACCAGCGTGATGTACCTGATCAAGACCGGCCAGATCGCCTTCTAG
PROTEIN sequence
Length: 317
MIDVLNLAMPYFGLIFVGYVCGKWRNLPESGLAWMNFFVLYVSLPALFFRIMSRTPFEELANPPFVIATTAATAAAFFLSAIVGKLIGRLPLREAAMAGLAGGYGNIGYMGPALALALFGLPSAVPTALIFCFDSIFLFSVIPLWMALTDGTRRPLLPTLWFVVKEIVLHPLIVAVYCGALAAAFHLQLPVALDSMLQFLQSSAAPVALFVLGVTVALRPLGRVPWEIPGLVLIKLVIHPILVFALVWWLGPFTPEWSATAVLMASLPPALNVFVIARQYDTWTEPASVAVLIGTFVSVVTLTSVMYLIKTGQIAF*