ggKbase home page

SCNpilot_expt_500_p_scaffold_28815_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: comp(2..1846)

Top 3 Functional Annotations

Value Algorithm Source
DNA methylase n=1 Tax=Empedobacter brevis RepID=UPI00037E6514 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 615.0
  • Bit_score: 1190
  • Evalue 0.0
DNA methylase {ECO:0000313|EMBL:KEQ30170.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 615.0
  • Bit_score: 1197
  • Evalue 0.0
N-6 DNA methylase similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 615.0
  • Bit_score: 1180
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1845
GTAAAGTGTCATCAGGGCAATATGCACATTTGGGAAAAATATGCCGTCAAAGCCGAAAGCCGGACGTTTGACGGTATTGCCCTGCTCAAACACGCACTCGTTAACACTACGCCCGACATTACCAAAAAAGTAATGATTGGCGACCAGGAAGTGAAAGTGCGGGATATGGAAGCCATACAAATGGCGAATACCAAGATTGATGAAATCCGTACCGCTTTTACCGAGTGGCTACACGCTCAAAACGACGAGTTCAAAACAAGGCTTACCGACCAATACAACGATACTTTTAATTGCTTCGTCCGCCCGAACTATGACGGAACCCATCAGGATTTTCCCGGATTAGACCGCAAGGCATTAGGCATTGAGGATTTGTATGCCAGCCAAAAGGACACCGTTTGGATGATAAAGCTGAACAATGGTGCTATCTGCGACCACGAAGTTGGTGCAGGAAAAACGCTCGTGATGTGTACAGCTGCACAGGAAATGAAGCGTTTGGGACTGGCGCACAAGCCAATGATTATCGGGCTGAAGAGCAATGTCCACGAAATTGCCCAAGCCTACCGCACTGCCTATCCGCACGCTAAAATCCTGTTTCCAGGCAAGGAAGATTTTACACCACAAAAACGCCTCCGCATTTTCGGCGATATTAAAAACAACGAGTGGGATTGCGTAATACTCACGCACGACCAATTCGGGATGATACCGCAGTCGCCCGAAATACAAAAGGAAATCCTCGAACTCGAACTGGACAGTGTGGAGCGTAACCTCGATGCCCTGAAATTGCAAGGCAAGGAAGTAACCAGGGGGATGCTCGCCGGGGTCATCAAGCGTAAAGAAAACCTTGAAGTAAAGCTCAAAACCCTTGAACACGATATTGAGAACCGCAAGGATGATGTGGTGGATTTTAAAATGATGGGCATTGACCATCTGTTCGTGGACGAAAGCCACCAATTCAAAAACCTTATGTTCAACACAAGGCACACAAGGGTTGCCGGGTTGGGCAACGTGGATGGCAGTCTAAAGGCAATGAACCTGCTGTTTGCTATCCGTACCATTCAGGAGCGCATTAATGCGGATATGGGCGCAACCTTTCTTTCGGGTACAACCATCAGCAACTCCTTAACGGAGCTGTACCTGCTGTTCAAATACCTGCGACCACGGGCAATGGAAAAACAGGGCATTCATTCCTTTGATGCCTGGGCAGCTATCTACGCAAGGAAAACCACCGATTACGAATTTTCGGTAGCTAACAATATCGTGGCGAAAGAGCGTTTCCGCTACTTTATCAAAGTGCCGGAACTGGCGCAGTTCTATTCTGAAATTACAGATTACAGAACGGCAAAAGATATTGGTATTGACCGCCCGAACAAGAACGAGGTATTGTACAACATACCGCCTACGCCCGACCAGGAAGCATTTATTAAAAAGCTGATGGAGTTTGCCAAAACAGGCAATGCAGAACTGCTCGACAGACCTAAATTAAGTGCCAGCGAAGAAAAAGCAAAGATGCTCATCGCTACGGACTACGCCCGCAAAATGTCGCTCGATATGCGTATGGTAGGCGGCAGGTACGCCGACCATCCCGACAACAAGGCTTCGCATTGTGCGGCAAATATCGCCAAGTATTATAACCAATACAATGCACAGAAAGGAACGCAGTTCGTTTTCTCCGATTTGGGAACCTACAAGCCGGGCGAATGGAACGTGTACTCTGAAATCAAGCGCAAGCTGGTGGAAGACCACGGCATCCCTGCGCACGAAGTAAGGTTTATACAGGAAGCGAAAAATGATAAGCAACGCAAGGAGCTTATCAAAGGAATGAACGAGGGCAAAATCCGTGTGCTG
PROTEIN sequence
Length: 615
VKCHQGNMHIWEKYAVKAESRTFDGIALLKHALVNTTPDITKKVMIGDQEVKVRDMEAIQMANTKIDEIRTAFTEWLHAQNDEFKTRLTDQYNDTFNCFVRPNYDGTHQDFPGLDRKALGIEDLYASQKDTVWMIKLNNGAICDHEVGAGKTLVMCTAAQEMKRLGLAHKPMIIGLKSNVHEIAQAYRTAYPHAKILFPGKEDFTPQKRLRIFGDIKNNEWDCVILTHDQFGMIPQSPEIQKEILELELDSVERNLDALKLQGKEVTRGMLAGVIKRKENLEVKLKTLEHDIENRKDDVVDFKMMGIDHLFVDESHQFKNLMFNTRHTRVAGLGNVDGSLKAMNLLFAIRTIQERINADMGATFLSGTTISNSLTELYLLFKYLRPRAMEKQGIHSFDAWAAIYARKTTDYEFSVANNIVAKERFRYFIKVPELAQFYSEITDYRTAKDIGIDRPNKNEVLYNIPPTPDQEAFIKKLMEFAKTGNAELLDRPKLSASEEKAKMLIATDYARKMSLDMRMVGGRYADHPDNKASHCAANIAKYYNQYNAQKGTQFVFSDLGTYKPGEWNVYSEIKRKLVEDHGIPAHEVRFIQEAKNDKQRKELIKGMNEGKIRVL