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SCNpilot_expt_500_p_scaffold_37333_2

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Location: comp(639..1454)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FSV7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 271.0
  • Bit_score: 381
  • Evalue 9.40e-103
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEI94081.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 271.0
  • Bit_score: 381
  • Evalue 1.30e-102
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 273.0
  • Bit_score: 302
  • Evalue 1.00e-79
  • rbh

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
ATAGCAGAAATAAGCAGCAGTACTTTAATTAATCAGGAAGCCATTTACAAAAGCATAAACCGAACAAAGAAAGACATTCAGCTTGAGTTTAACGGCAATACAGTTGACCTGAATACAATTTCAGCTAATCAACGAGCTATTGCCATTGCGGAAGAAATTTTTTATGCAGTTTTCAATATCGGTTTTGACTCTTTTAGCGAAAAGACGGAAAATATTGTAAATGAAGATTTATGTTTGGAAGCATTTGCTTTGACAAAATTTTTGTTCAGTCAATATCAAAGTGTTTCAACAAGCAATCTGTTGGCTCTTTTTTGTTTTCATATTGCAAGAATTCCTGCAAAAATTGATGATGAAAAGCTCATTTCATTTTTCAATCAAAATCGTGAAAAATGGAATAAAGAATTGCTCAACTTGGGCTTTCATTATCTCATAAAGCCGAAAGAAATAAGCAAGTTTTATCTTGAAGCGGTCATTGTCATTAAGTATATGTCGATAAGCCAATTAACGCAAAACGATTGGAATGATATTGTAAAACTCTATGAATTGATGCAACAAGTTTCGCAGTCGCCTATTGTAAAACTTAACTATTGTTTTTGTTTAAGCAAAATTGGCAAAACCGATGATGCATTGAAGATTCTTTCGAAAATTGAAAAAGAGTTACCCAACGAACACGTCTATTTTTCTTTGGTAAAAGCGAAAATTCTAAAAGAAATCAATCCTAAAGAATCCGATCATTTATTCATCTCGGCTATGAATAAAATGAACCAAAAAATCAGAAAAGAATATTTATTAGGAAACGAACTAATCCGATTATAA
PROTEIN sequence
Length: 272
IAEISSSTLINQEAIYKSINRTKKDIQLEFNGNTVDLNTISANQRAIAIAEEIFYAVFNIGFDSFSEKTENIVNEDLCLEAFALTKFLFSQYQSVSTSNLLALFCFHIARIPAKIDDEKLISFFNQNREKWNKELLNLGFHYLIKPKEISKFYLEAVIVIKYMSISQLTQNDWNDIVKLYELMQQVSQSPIVKLNYCFCLSKIGKTDDALKILSKIEKELPNEHVYFSLVKAKILKEINPKESDHLFISAMNKMNQKIRKEYLLGNELIRL*