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SCNpilot_BF_INOC_Flavobacteriia_40_10

SCNPILOT_EXPT_500_P_Chryseobacterium_39_3
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Chryseobacterium  →  Flavobacteriales  →  Flavobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.86 Longest contig: 5.07 Kbp Bin length: 617.05 Kbp GC content: 39.32 %
Contigs count: 437 Features count: 891 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 7 / 55 BSCG 9 / 51 MC: 1 ASCG 3 / 38
Displaying items 101-150 of 437 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_52822
Species: Chryseobacterium solincola (50%)
2 1073 bp 41.01 1.86 88.35
SCNpilot_expt_500_p_scaffold_37312
Species: Formosa agariphila (50%)
2 1456 bp 33.59 1.37 44.71
SCNpilot_expt_500_p_scaffold_51767
Species: Epilithonimonas sp. FH1 (50%)
2 1091 bp 36.11 1.15 96.79
SCNpilot_expt_500_p_scaffold_26012
Species: Cyclobacteriaceae bacterium AK24 (50%)
2 2027 bp 27.92 3.45 92.80
SCNpilot_expt_500_p_scaffold_47867
Species: Elizabethkingia anophelis (100%)
2 1167 bp 32.90 1.29 85.60
SCNpilot_expt_500_p_scaffold_36285
Species: RHI_OD1_Yanofskybacteria_45_19b (50%)
2 1493 bp 33.56 3.85 80.78
SCNpilot_expt_500_p_scaffold_38712
Species: Chryseobacterium jeonii (50%)
2 1406 bp 40.75 2.13 99.86
SCNpilot_expt_500_p_scaffold_38968
Species: Bacteroides sp. CAG:545 (50%)
2 1398 bp 40.56 2.86 88.20
SCNpilot_expt_500_p_scaffold_50015
Species: Chryseobacterium gleum (50%)
2 1124 bp 42.97 1.78 68.59
SCNpilot_expt_500_p_scaffold_29755
Species: Chryseobacterium jeonii (100%)
2 1793 bp 42.94 2.51 98.05
SCNpilot_expt_500_p_scaffold_50530
Species: Elizabethkingia meningoseptica (50%)
2 1115 bp 25.65 1.12 99.55
SCNpilot_expt_500_p_scaffold_32861
Species: Chryseobacterium jeonii (50%)
2 1637 bp 40.56 3.05 96.95
SCNpilot_expt_500_p_scaffold_42412
Species: Chryseobacterium sp. StRB126 (50%)
2 1296 bp 40.82 1.00 89.58
SCNpilot_expt_500_p_scaffold_49254
Species: Chryseobacterium soli (50%)
2 1139 bp 35.73 2.63 76.38
SCNpilot_expt_500_p_scaffold_23176
Species: Chryseobacterium jeonii (100%)
2 2250 bp 38.27 3.11 90.40
SCNpilot_expt_500_p_scaffold_39067
Species: Chryseobacterium sp. CF314 (50%)
2 1394 bp 40.03 1.08 79.41
SCNpilot_expt_500_p_scaffold_52586
Species: Chryseobacterium sp. StRB126 (50%)
2 1077 bp 40.02 1.39 86.91
SCNpilot_expt_500_p_scaffold_37333
Species: Sphingobacterium spiritivorum (100%)
2 1456 bp 31.59 3.26 89.42
SCNpilot_expt_500_p_scaffold_50540
Species: Chryseobacterium formosense (50%)
2 1115 bp 41.43 1.35 87.17
SCNpilot_expt_500_p_scaffold_55400
Species: Chryseobacterium antarcticum (50%)
2 1030 bp 40.10 1.00 91.46
SCNpilot_expt_500_p_scaffold_32618
Species: Flavobacteria bacterium BBFL7 (50%)
2 1648 bp 32.52 3.03 28.40
SCNpilot_expt_500_p_scaffold_54313
Species: Chryseobacterium sp. StRB126 (50%)
2 1048 bp 35.40 1.43 58.97
SCNpilot_expt_500_p_scaffold_40259
Species: Chryseobacterium indologenes (50%)
2 1357 bp 37.29 2.58 38.25
SCNpilot_expt_500_p_scaffold_42171
Species: Chryseobacterium sp. JM1 (50%)
2 1302 bp 41.40 3.84 95.62
SCNpilot_expt_500_p_scaffold_49012
Species: RIFOXYB2_FULL_RIF07_49_35_curated (50%)
2 1143 bp 38.85 1.00 81.89
SCNpilot_expt_500_p_scaffold_55663
Species: Chryseobacterium antarcticum (100%)
2 1026 bp 38.60 1.00 58.77
SCNpilot_expt_500_p_scaffold_42687
Species: Epilithonimonas lactis (50%)
2 1289 bp 43.75 1.94 101.71
SCNpilot_expt_500_p_scaffold_40269
Species: Flavobacteriaceae bacterium 3519-10 (50%)
2 1357 bp 39.20 2.95 86.88
SCNpilot_expt_500_p_scaffold_54838
Species: Parabacteroides merdae (50%)
2 1039 bp 27.05 3.13 78.83
SCNpilot_expt_500_p_scaffold_35056
Species: Flavobacterium hibernum (50%)
2 1541 bp 40.62 1.62 98.31
SCNpilot_expt_500_p_scaffold_35824
Species: Bizionia argentinensis (50%)
2 1511 bp 44.01 6.78 80.01
SCNpilot_expt_500_p_scaffold_50560
Species: Chryseobacterium solincola (50%)
2 1114 bp 36.45 4.94 90.75
SCNpilot_expt_500_p_scaffold_24330
Species: Epilithonimonas sp. FH1 (50%)
2 2154 bp 37.70 2.55 78.41
SCNpilot_expt_500_p_scaffold_41249
Species: Chryseobacterium formosense (50%)
2 1328 bp 38.86 1.51 71.16
SCNpilot_expt_500_p_scaffold_22690
Species: Chryseobacterium antarcticum (100%)
2 2294 bp 39.32 1.31 93.37
SCNpilot_expt_500_p_scaffold_31459
Species: Chryseobacterium soli (50%)
2 1704 bp 39.14 2.35 99.47
SCNpilot_expt_500_p_scaffold_28692
Species: Chryseobacterium jeonii (50%)
2 1853 bp 43.34 2.16 95.04
SCNpilot_expt_500_p_scaffold_42443
Species: Flavobacterium suncheonense (50%)
2 1295 bp 43.40 5.02 93.13
SCNpilot_expt_500_p_scaffold_38754
Species: Chryseobacterium indologenes (50%)
2 1404 bp 41.52 1.78 98.08
SCNpilot_expt_500_p_scaffold_37618
Species: Chryseobacterium solincola (50%)
2 1446 bp 40.66 1.73 95.44
SCNpilot_expt_500_p_scaffold_48377
Species: Chryseobacterium jeonii (50%)
2 1157 bp 41.57 2.59 83.49
SCNpilot_expt_500_p_scaffold_32643
Species: Chryseobacterium piperi (50%)
2 1647 bp 41.59 2.13 75.41
SCNpilot_expt_500_p_scaffold_56754
Species: Chryseobacterium piperi (50%)
2 1010 bp 35.54 2.48 59.70
SCNpilot_expt_500_p_scaffold_31724
Species: Chryseobacterium vrystaatense (50%)
2 1691 bp 39.62 1.00 91.72
SCNpilot_expt_500_p_scaffold_49803
Species: Chryseobacterium sp. CF314 (50%)
2 1129 bp 39.42 1.33 96.72
SCNpilot_expt_500_p_scaffold_49805
Species: Chryseobacterium sp. CF314 (50%)
2 1129 bp 38.53 2.66 91.41
SCNpilot_expt_500_p_scaffold_45389
Species: Flavobacteriaceae bacterium 3519-10 (100%)
2 1221 bp 39.64 2.05 92.38
SCNpilot_expt_500_p_scaffold_45645
Species: Flavobacteriaceae bacterium 3519-10 (100%)
2 1215 bp 40.66 6.17 86.17
SCNpilot_expt_500_p_scaffold_56246
Species: Chryseobacterium taiwanense (50%)
2 1018 bp 40.86 2.95 96.95
SCNpilot_expt_500_p_scaffold_52879
Species: Flavobacterium frigoris (50%)
2 1072 bp 38.15 3.26 96.83
Displaying items 101-150 of 437 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.