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SCNpilot_expt_500_p_scaffold_49700_1

Organism: SCNpilot_P_inoc_Planctomycetales_70_10

partial RP 3 / 55 BSCG 2 / 51 MC: 1 ASCG 1 / 38
Location: 614..1129

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5X8_ISOPI similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 129
  • Evalue 3.10e-27
sigma-70 familyRNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 129
  • Evalue 9.80e-28
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV63880.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 129
  • Evalue 4.40e-27

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Taxonomy

Isosphaera pallida → Isosphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 516
TTGGAAGCAGGCGAACCGAAAGCCAAGCTCTCCGAGCTGATGACCCAGACGACGCTGCTCTATCAGGCCCAGAACGGGACGCCGGAGCAGGCCGACGCGGCCAAGCAACTGCTGATGCTTCGCTATTCCGGCGCCGTCCACCGCTACCTCCTGAAGGTCGTCGGCGACCCCGAGGCCGCCCGCGACCTCAACCAGGAGTTCTCGGTCAAGTTCCTGGAGGGGAAGTTCCGCCACTTCGACCCCAGCCGGGGCCGGTTCCGCGACTACCTCAAGCGGGCCCTGCACAACCTGATGGTCGACCATTTCCGCAAGCGCCAGGGGGCGGCCCAGCTCGACACCGCCATGGAGGCCGACATCGTCGGCGACGACGGCCTGGGCGAGTTCGACCGGCAGTTCCTCATCAGTTGGCGGCAGGACCTACTCGCCCGCGCCTGGGACGCGCTGCGGGCCTATGAGTCCAACACGGGGAAGCCGTTCCACGAGGTGATGCGGCTCCGCCTGGCCCGGCCGAAGATG
PROTEIN sequence
Length: 172
LEAGEPKAKLSELMTQTTLLYQAQNGTPEQADAAKQLLMLRYSGAVHRYLLKVVGDPEAARDLNQEFSVKFLEGKFRHFDPSRGRFRDYLKRALHNLMVDHFRKRQGAAQLDTAMEADIVGDDGLGEFDRQFLISWRQDLLARAWDALRAYESNTGKPFHEVMRLRLARPKM