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SCNpilot_expt_500_p_scaffold_19429_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(372..1775)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator id=12498126 bin=THIO_MID species=Cellvibrio japonicus genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 468.0
  • Bit_score: 916
  • Evalue 1.10e-263
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 467.0
  • Bit_score: 584
  • Evalue 3.00e-164
  • rbh
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 467.0
  • Bit_score: 700
  • Evalue 1.30e-198

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGAGATCGCGGTATCGACAGCTGGCCGATGAAATCGCGCAGCACATCGAACGCGGTGTGTACGCGGCTGGCGACCGTCTGCCCAGTGTGCGGGCGCTCGCGCGCTCGCGCGGCGTGAGCGTGGTGACTGTGGTGACTGCATACCAGACGCTGCTGGACGAGGGACGGATCGAGGCGCGTCCGCGTTCGGGGTTCTACGTTCGCGCGCAACGGCCGATTCAGCCGATCGAAGCCGAATCCGGTGCCAGCGCGGTGCCGCCCCGCCCTGTCACCGGCCAGGCGATGGCGATGACCCTGATCAAGGCGGCGAATACGTCCGGCATCGTCCAGCTCGGGGCCGCCGTGCCCGATCCGTCCTTTCTGCCCACGCAGGCGATCGGGCGGGCCATGGCGCAGGTGATGCGCACGCGGCGCGCGCAGGCGGCCGGTTACATGATGCCGCCCGGCGCGCCCGAGCTGCGCCGTCAGATCGCCCGGCGCATGAGTGAGAACGGGGCCGGTGTCGCGGCCGACGATATCGTCGTCACGACGGCCTGTCAGGAGGCGCTGAGTCTTGCCCTGCGTGCGGTGACCCGGCCGGGCGACGTCGTTGCGGTGGAATCGCCGGCCTTCTATGGCCTGCTGCACGTACTGGAATCGCTTGGTCTGGAGGCGCTGGAGATTCCCGCCCGGCCGCGCGACGGCCCCGCGCTCGACGCGCTGGCCTTTGCGCTCGAACGCTGGCCGGTCAGGGCTTGCGTACTTGCGCCGAACTACGGCAATCCGCTCGGCTACTGCATGCCGGACGAAATCAAACGGGCGCTGATCCGTCTGCTTGGCCGTCACAGGGTCCCGCTGATCGAGGACGACGTCTACGGCGATCTGGGGTTTGGCGTGCCGCGCCCTTCGACCTGCAAGGGGTTGGCGCCGCGCGCCGACATCCTCTATTGCAGCTCGTTCTCGAAAACGCTTTCACCGGGTTTGCGCGTCGGCTGGATCGCGGCCGGCCGGCACCATGCGCGCGTCGAATATCTGAAATACGTTACCAGCATCGCCAGTCCGACCGCACCGCAGCTGGCCGTTGCGGACCTGCTGGCCGGCGGTCGCTACGAGCGCCATCTGCGCGAGATACGCGGCAAGTACGCCAGCGCCGTGGCGCGGATGAGCGACCGCGTGATGGAAGTCTTTCCCGAAGGCACGCGCATTTCGCAGCCGCAGGGCGGCTTCGTGCTCTGGGTGGAACTGCCGGAAGGGACGGACAGCGTCGCGCTGGCGCGCCGCGCCCTGCGCCAGGGCGTGAGCGTCGCACCCGGACCGCTGTTCTCGGCAAGCGGCAAATACGGCAATTTCATTCGGCTGTCGTGCGCCCGCGTCTGGGATGCGCAACTGGATCGCGCGCTGCTGACGCTGGCGAAGCTGCTCTAG
PROTEIN sequence
Length: 468
MRSRYRQLADEIAQHIERGVYAAGDRLPSVRALARSRGVSVVTVVTAYQTLLDEGRIEARPRSGFYVRAQRPIQPIEAESGASAVPPRPVTGQAMAMTLIKAANTSGIVQLGAAVPDPSFLPTQAIGRAMAQVMRTRRAQAAGYMMPPGAPELRRQIARRMSENGAGVAADDIVVTTACQEALSLALRAVTRPGDVVAVESPAFYGLLHVLESLGLEALEIPARPRDGPALDALAFALERWPVRACVLAPNYGNPLGYCMPDEIKRALIRLLGRHRVPLIEDDVYGDLGFGVPRPSTCKGLAPRADILYCSSFSKTLSPGLRVGWIAAGRHHARVEYLKYVTSIASPTAPQLAVADLLAGGRYERHLREIRGKYASAVARMSDRVMEVFPEGTRISQPQGGFVLWVELPEGTDSVALARRALRQGVSVAPGPLFSASGKYGNFIRLSCARVWDAQLDRALLTLAKLL*