ggKbase home page

SCNpilot_expt_500_p_scaffold_32466_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(790..1656)

Top 3 Functional Annotations

Value Algorithm Source
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein id=12496959 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 591
  • Evalue 6.40e-166
  • rbh
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 283.0
  • Bit_score: 468
  • Evalue 1.10e-129
Urea ABC transporter, permease protein UrtC {ECO:0000313|EMBL:ACV34520.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 283.0
  • Bit_score: 468
  • Evalue 5.10e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter phosphatis → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
GGCATCCTGTCGCTCGGCCACGGGCTCTTCTTTGCCCTGGGCGGCTACGCCTTCGGCATGTATCTCATGCGGCAGATCGGCCGCGACGGCCAGTACCAGAGCGATCTGCCGGATTTCATGGTCTTTCTCGACTGGAAGGACTACCCCTGGTACTGGGCCGGCACCGATCATTTCCTCTGGGCGCTGGTGCTGGTGATCGCCGTGCCGGGCATCGTCGCCTTCGTCTTCGGCTGGTTCGCCTTCCGCTCGCGGATCAAGGGCGTGTATTTCTCGATCATCACGCAGGCGCTCACCTTCGCCGCGATGCTGCTGTTCTTCCGCAACGACACCGGGTTCGGCGGCAACAACGGCTTCACCGATTTCAAGCGCATCCTCGGGTTTCCGGTTGCCGCACCGGAAACCCGTGCCGTGCTGTTCGCGCTGACCGTAGCCTATGTCGCCGGCATTCTGGTGTTCTGCCGCTGGCTGATGCAGAGCAAGTTCGGCCGTGTGCTGGCGGCGATCCGCGATGCCGAATCGCGCACCATGTTCGTCGGCTACGACCCGCTGCCCTACAAGCTCGGCGTGTGGACGCTCTCGGCCGTGCTGTGCGGCATTGCCGGCGCGCTGTACGTGCCGCAGGTCGGCATCATCAATCCGTCCGAGATGTCGCCCGCCAATTCCATCGAGATCGCCATCTGGACCGCCATCGGCGGACGCGGCACGCTGATCGGGCCGCTCCTGGGCGCCGGCATCGTCAACGGCGCGAAGAGCTGGTTCACCGTGAGTTTTCCCGATCTGTGGCTGTACGTGCTGGGGGCGATGTTCGTGATCGCCACCCTGTTCCTGCCACGCGGCGTGATGGGCCTGCTGGGGAGAAAGGCATGA
PROTEIN sequence
Length: 289
GILSLGHGLFFALGGYAFGMYLMRQIGRDGQYQSDLPDFMVFLDWKDYPWYWAGTDHFLWALVLVIAVPGIVAFVFGWFAFRSRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFPVAAPETRAVLFALTVAYVAGILVFCRWLMQSKFGRVLAAIRDAESRTMFVGYDPLPYKLGVWTLSAVLCGIAGALYVPQVGIINPSEMSPANSIEIAIWTAIGGRGTLIGPLLGAGIVNGAKSWFTVSFPDLWLYVLGAMFVIATLFLPRGVMGLLGRKA*