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SCNpilot_expt_500_p_scaffold_31942_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 1504..1677

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq; K03666 host factor-I protein id=12497607 bin=THIO_MID species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 58.0
  • Bit_score: 115
  • Evalue 1.60e-23
RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 56.0
  • Bit_score: 109
  • Evalue 4.60e-22
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 58.0
  • Bit_score: 115
  • Evalue 2.20e-23

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
ATGGCGAGCAAAGAATACAACCACCTGCAAGATGTTTTTCTCAATACCCTGCGCAAGGAGCGCATCCCGGTATCGGTCTTCCTGGTCAACGGCATCAAGCTGATGGGCCGGATCGAGTCGTTCGACCAGTTCGTGGTGCTGCTGAAGGGTCAGGATCAGGCCGCGCAGATGATT
PROTEIN sequence
Length: 58
MASKEYNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMI