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SCNpilot_expt_500_p_scaffold_39305_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(3..560)

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH id=12497061 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 372
  • Evalue 2.30e-100
traH; putative TraH conjugative transfer protein; K12072 conjugative transfer pilus assembly protein TraH similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 177.0
  • Bit_score: 119
  • Evalue 1.40e-24
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 187.0
  • Bit_score: 322
  • Evalue 2.90e-85

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGACACCCAGACTGAAATCCTTGAGCGTTTCGCTCGCTGTCGCGGCAGGCCTCGCCCTGCCGTCGACCGCATCGAACGCCGCGTCCGACTGGATGAACGACTATTTCAACTCGGCCGGCGCGGGCCTCAACGTCACGCCATCGGCCGTATACGAATCCCAGAGCCAGACCACGATGTCCCTCGGCGGTTTCGCATACCGCGCACCGCAACGTGCCACGCAGTTTTTCAGCTTCTCGCCGCCCGGCTACAAGGCCGGCTGCGGCGGGATCGATGCCTGGCTGGGGGCTTACGGCTTCGTCAACATGGACCAGTTCGTCGCGGCGCTGCGGAATATCGGACAGAACGCCATCGGGTACTTCTTCCAGCTTGCGCTCAAGACGATGGCCCCGGAGATCGACGGTCTGCTGACGGACCTCTCCAAGACGATGAACGGGCTGAACCAGTTCCAGATCAGCAGTTGCCAGGCAATCAAGCAGTTCGTGGGAACAACCCCGGACACACGGAATATGGACATGGAGCAACGCGCGCAGGTTTTCGGCTCCGCGCTCACGGGTTCC
PROTEIN sequence
Length: 186
MTPRLKSLSVSLAVAAGLALPSTASNAASDWMNDYFNSAGAGLNVTPSAVYESQSQTTMSLGGFAYRAPQRATQFFSFSPPGYKAGCGGIDAWLGAYGFVNMDQFVAALRNIGQNAIGYFFQLALKTMAPEIDGLLTDLSKTMNGLNQFQISSCQAIKQFVGTTPDTRNMDMEQRAQVFGSALTGS