ggKbase home page

SCNpilot_expt_500_p_scaffold_35291_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 954..1532

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=12497026 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 366
  • Evalue 1.30e-98
RND family efflux transporter MFP subunit; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 188.0
  • Bit_score: 217
  • Evalue 3.10e-54
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 194.0
  • Bit_score: 314
  • Evalue 8.20e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAACGCATGACCCTGCTGCTCGTTCTGCCCCTGCTCACCGCCTGCGGTTCCGGCGACAAGGACGCAGCGGGGGGCGCCGGTGCCCCCGGCGCCATGCCGCCGCCGGAGATCGCCGTGGTCACGGTCGGCAGCCGGGCCGCCACGCTGACGCGGGAACTACCCGGCCGGGTCGAAGCAGTGCGGACGGCGCAGGTGCGCGCACGCGTCGAGGGCATCGTCGAGAAACGCCTGTTCACCGAAGGCAGCAACGTGAAGGCGGGCCAGCCCCTGTTCCGGCTGGACGACCGCACCTACCGCACGGCCGCCCAGGCTGCCGAAGCGGATGTGGAAGTGAAGAAGCTCAATCTCGAACGCGTCGAATCGCTGTTGCCGATCAAGGCCGTCAGCCAGCAGGAAGTCGATCTCGCACGCGCGGCACTGAAGCAGTCGCAGGCCCAGCTCGCACGGGCACGGCTCGATCTTGAAAACACGACCGTGCCAGCGCCCATTTCCGGCCACATCGGCCGCACCCAGGTGACCGAAGGCGCCCTGGTCGGCCGCAGCGATGCCACGCTGATGGCAACCATCGATCAGCTC
PROTEIN sequence
Length: 193
MKRMTLLLVLPLLTACGSGDKDAAGGAGAPGAMPPPEIAVVTVGSRAATLTRELPGRVEAVRTAQVRARVEGIVEKRLFTEGSNVKAGQPLFRLDDRTYRTAAQAAEADVEVKKLNLERVESLLPIKAVSQQEVDLARAALKQSQAQLARARLDLENTTVPAPISGHIGRTQVTEGALVGRSDATLMATIDQL