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SCNpilot_expt_500_p_scaffold_40650_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(1..759)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=12495942 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 253.0
  • Bit_score: 511
  • Evalue 5.60e-142
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 259.0
  • Bit_score: 421
  • Evalue 1.40e-115
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 259.0
  • Bit_score: 421
  • Evalue 6.30e-115

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCACGAATCGGTTGCGCACCTTCTGGAACGTCTCGGCGTCCCCGTGACCGAGCTGGTCAACGACAGCCGCAAGGCCGCGCCCGGCGCCGTATTCGTGGCCTACCCGGGCGAGACGCGCGACGGCCGGGACTTCATTCCGCAGGCCGTCGCACAGCGTGTCGACGGCGTGCTGTGGGAGGCCGACCACTACCAGTGGGACCCGGCGCTCGGCACGGCCAATACCGGCGTCGCCGACCTGCGCCGCCGGATCGGCGAAATTGCTGCGCATGTTTACGGTCAGCCGTCGCGGGCACTGCACACGATCGGCGTTACCGGTACCAATGGCAAAACTTCGGTGGCGCACTGGATCGCACAGGCGCTCACCCGGCTCGGCCGCAAGACTGCCGTGATCGGTACGGTGGGCAACGGTTTTCCCGGCGCACTGGCGTCCGCGCTCAATACCACGCCCGATGCCATCGATCTGCAGCGGCGGCTTGCGCACTATCGCCAGCAGGGCGCCGTCGCCTGTGCGATGGAGGTTTCCTCGCACGGCCTCGCGCAGGACCGTGTCAACGGCACGGCATTCAAGATCGCGGTGCTGACCAATCTCTCGCGCGACCATCTCGATTACCACGGCGACATGGACAACTACGCCGCCGCCAAGGCCCGCCTGTTTGCCTGGCCGGGGCTCGAGTGGGCCGTCCTCAACGTCGACGATGCCTTCGGCCGCCAGCTCGAAGGCGAGACCCGGCCGTCGCGCGTCGCCTGCTACGGCTTT
PROTEIN sequence
Length: 253
MHESVAHLLERLGVPVTELVNDSRKAAPGAVFVAYPGETRDGRDFIPQAVAQRVDGVLWEADHYQWDPALGTANTGVADLRRRIGEIAAHVYGQPSRALHTIGVTGTNGKTSVAHWIAQALTRLGRKTAVIGTVGNGFPGALASALNTTPDAIDLQRRLAHYRQQGAVACAMEVSSHGLAQDRVNGTAFKIAVLTNLSRDHLDYHGDMDNYAAAKARLFAWPGLEWAVLNVDDAFGRQLEGETRPSRVACYGF