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SCNpilot_expt_500_p_scaffold_42862_3

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 948..1283

Top 3 Functional Annotations

Value Algorithm Source
type II and III secretion system protein id=12498044 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 220
  • Evalue 6.70e-55
General secretion pathway protein GspD {ECO:0000313|EMBL:GAO34641.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 89.0
  • Bit_score: 131
  • Evalue 7.50e-28
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 89.0
  • Bit_score: 129
  • Evalue 6.40e-28

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Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGCTCTTCCGCCTGCGCCATCTGACTGCTTTCGCGCTGGTCTGCCTGCTGGTGTGCCTGCCCCGTTTCGCGCACGCCCAGGGCGACGCGGTCGTGCTCAATTTCGTGAACGCCGACATCCCGTCGGTGATCAAGGCGGTAGGCGAGCTTACCGGCCGGAATTTCGTGGTCGATCCGCGCGTGAAGGGCACGGTGATCATCACCTCCGCCAAACCGGTGTCGCGCGACCTCGTCTATCCCATCCTGCTGTCCGCGCTGCGCATGCAGGGCTTTACCGCCATCGAAGGGCAGGGCGCCACCAAGATCGTGCCCGAGGTCGAGGCCAAGCAGAATTAC
PROTEIN sequence
Length: 112
MLFRLRHLTAFALVCLLVCLPRFAHAQGDAVVLNFVNADIPSVIKAVGELTGRNFVVDPRVKGTVIITSAKPVSRDLVYPILLSALRMQGFTAIEGQGATKIVPEVEAKQNY