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SCNpilot_expt_500_p_scaffold_53219_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 870..1064

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12497232 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 65.0
  • Bit_score: 127
  • Evalue 5.80e-27
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 65.0
  • Bit_score: 120
  • Evalue 1.70e-25
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 65.0
  • Bit_score: 120
  • Evalue 7.70e-25

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
GTGAACAAGTTTCCACTTACCGTGATTGGCGCCGAGAAACTGCGCGTCGAATTGCAGCATCTGAAGTCGGTCGAGCGGCCGTCCGTGATCCAGGCAATTGCCGAGGCGCGTGCGCAGGGCGACCTGTCGGAAAACGCCGAGTACGATGCTGCCAAGGAAAAACAGGGCTTCATCGAGGGCCGCATCGCCGAACTC
PROTEIN sequence
Length: 65
VNKFPLTVIGAEKLRVELQHLKSVERPSVIQAIAEARAQGDLSENAEYDAAKEKQGFIEGRIAEL