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SCNpilot_expt_500_p_scaffold_53283_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(800..1063)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) id=12498226 bin=THIO_MID species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 177
  • Evalue 6.70e-42
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EGV28156.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 83.0
  • Bit_score: 116
  • Evalue 1.50e-23
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 85.0
  • Bit_score: 114
  • Evalue 1.30e-23

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Taxonomy

Thiorhodococcus drewsii → Thiorhodococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
CCGCTGGACATGATCAAGATCGACCAGTCGTTCGTACGCGACATCCCCGGCGACCCGAACAGCGCGGCGATCGTGCGTGCGATCCTGGCGATGAGCCAGTCGCTCGGCCTGCTGACGATCGCCGAGGGGGTGGAAACACCGGCACAGCGGGATTTCCTGCTCCAGCACGGCTGCACCGCCTTCCAGGGCTATCTGTTCGGACGCCCCGTGCCGATCGAGGCCTGGACCGCCAGTGCCCGGACCGGCGCTGCCGATCCGGACTGA
PROTEIN sequence
Length: 88
PLDMIKIDQSFVRDIPGDPNSAAIVRAILAMSQSLGLLTIAEGVETPAQRDFLLQHGCTAFQGYLFGRPVPIEAWTASARTGAADPD*