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SCNpilot_expt_500_p_scaffold_54060_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(406..1050)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c biogenesis protein, transmembrane region (EC:1.8.1.8) id=12497732 bin=THIO_MID species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 434
  • Evalue 5.70e-119
cytochrome c biogenesis protein, transmembrane region (EC:1.8.1.8) similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 216.0
  • Bit_score: 249
  • Evalue 1.10e-63
Cytochrome c biogenesis protein, transmembrane {ECO:0000313|EMBL:EGJ10851.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 215.0
  • Bit_score: 250
  • Evalue 2.80e-63

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
CCGAAGCCGGGGCCGTGGATGGCGCGCTTGCGCACCTTGCTGGCCTTCCCGATGTTCGCCACGGTGGTCTGGCTGCTCTGGGTACTGGGCGTGCAGGTGGGGGTGGCGGGCGTCGTCGGGTTGTTGGGCGTACTGCTGGCCGTCGCATTTGCCGTGTGGGCCTGGGCTCTGCCCGGCCGCAGTCGCATCGGGCTGGGCGTTCCAGCTTTGGCGCTGGCCGCCGCCGCCGGGGTTTGGGCGGCGCCGGCACTGCGTCCGGCGGGAGACGTTCCGCCTGTCGTGGAGGCCGGCTGGATGCCCTGGACACCTGAACGGGAGGCCAGCCTCCGGGCGTCCGGCCAGCCGGTGTTCGTCGATTTCACCGCCGCCTGGTGCATCACCTGCCAGGTCAACAAGCGCACCACGCTGACCGATCCGGCCGTGCTGGCCGATTTCAAACGGGCCGGCGTGGCGTTGCTGCGCGCCGACTGGACTGCGCGCGATCCGGCCATTACGGCGGCACTGGCGCAGCTCGGCCGCAGCGGCGTGCCGGTGTATGTGTTGTATCCGGGCGGTGCGCGCGCACCGCTGGTATTGAACGAACTGCTTTCTCCCGGAGAGATCCGGACCGCGCTCGACCCCCTGAAACGAAAGGAGACCTTATGA
PROTEIN sequence
Length: 215
PKPGPWMARLRTLLAFPMFATVVWLLWVLGVQVGVAGVVGLLGVLLAVAFAVWAWALPGRSRIGLGVPALALAAAAGVWAAPALRPAGDVPPVVEAGWMPWTPEREASLRASGQPVFVDFTAAWCITCQVNKRTTLTDPAVLADFKRAGVALLRADWTARDPAITAALAQLGRSGVPVYVLYPGGARAPLVLNELLSPGEIRTALDPLKRKETL*