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SCNpilot_expt_500_p_scaffold_52648_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(63..1073)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator id=12498365 bin=THIO_MID species=Burkholderia sp. TJI49 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 326.0
  • Bit_score: 656
  • Evalue 1.90e-185
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:KEZ03337.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 325.0
  • Bit_score: 486
  • Evalue 2.80e-134
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 323.0
  • Bit_score: 474
  • Evalue 2.40e-131
  • rbh

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Taxonomy

Burkholderia sp. MSh2 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
TCACAGTGCTTAGTGTGGATTTACAATGGCCCGATGGAACCTTCCTTGCTCCCGTCGCTTGCCTGGTTTGTGCGTGTGGCCCATCACCACAGCTTTACCAAGGCTGCGGCCGAAATGGGCGTGACGCGGGCGGCCCTGTCGCAGAATCTCAAGTCGCTTGAGCGGCGGTTGAACGTCAGGCTGCTCTACCGCACCACGCGCGACATGTCGCTGACCGAAGCCGGGCAGCGGCTGTTCGATTCGCTGCAACCCGCACTCGGGCTCATTGAGCAGGCCATGCGCGGAGTCAACGAGGCCGGCGCGGAGCCCTCGGGTTTGCTACGGATCAACACCGCTCGCATCGCCGCCAAGACACTGATCGAGCCGTATCTCGGCGAATTCCTCGGGCGTTACCCTAGGCTGCGACTGGAACTGGTGATGGACGACGGGCTCTCGAACATTATCGCCGACGGCTGCGATGCCGGCATCCGCATTGGCGAGAGCCTTGCGCCGCACATGATCGCCGTGCCGATCACGCCCATGCTGGAAATGGCCGTGGTCGGCAGCCCCGACTACTTCGCGCGGCATGGCCGACCCGATACGCCCGCCGATCTCGCGAGGCACGACTGCCTGAATTACCGGTTCACCACGGGCGGCGCGATCCATCAATGGGAATTCTCCGCGCCGGACGTCGAGGGGCACGATTTCACGGTCGCACCCCAGGGCCGTTTCATCACCAACGACGACGACGGCATGATCCGCGCCGCCTTGCAGGGCGTGGGCCTCATCCAGCATCTCGATCTTGCCGTGCAGCAGCATTTGAACGAAGGCACGCTGGTCCGGGTACTGCAGCCCTGGTGCAAGCCGTTTCCGGGCTTTTATCTTTACCTGCCGTCCCGCGAGCAGATGCCGTCCAAGGTCAGGGCGTTGCTGGATTTTCTGATCGGGAAGCGCGAGGCGATGAGTTCGACGCAGATCGGGAAACGGCCGGGAAAACCCGGCGCAGACCGGCGGCCGCGTGGCAAAAAATAA
PROTEIN sequence
Length: 337
SQCLVWIYNGPMEPSLLPSLAWFVRVAHHHSFTKAAAEMGVTRAALSQNLKSLERRLNVRLLYRTTRDMSLTEAGQRLFDSLQPALGLIEQAMRGVNEAGAEPSGLLRINTARIAAKTLIEPYLGEFLGRYPRLRLELVMDDGLSNIIADGCDAGIRIGESLAPHMIAVPITPMLEMAVVGSPDYFARHGRPDTPADLARHDCLNYRFTTGGAIHQWEFSAPDVEGHDFTVAPQGRFITNDDDGMIRAALQGVGLIQHLDLAVQQHLNEGTLVRVLQPWCKPFPGFYLYLPSREQMPSKVRALLDFLIGKREAMSSTQIGKRPGKPGADRRPRGKK*