ggKbase home page

SCNpilot_expt_500_p_scaffold_54866_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 414..1037

Top 3 Functional Annotations

Value Algorithm Source
transposase, IS4 id=12498613 bin=THIO_MID species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 423
  • Evalue 9.70e-116
Transposase IS4 family protein {ECO:0000313|EMBL:EER59864.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 207.0
  • Bit_score: 371
  • Evalue 8.00e-100
transposase, IS4 similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 207.0
  • Bit_score: 362
  • Evalue 1.10e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGATGAAACAACAGACTTTAGCGATGGCCGCCGATCAAGAAACGGGCTTTGCCGCGTACCGCAAACCCACGCGACGCGACGAATTTCTCAGGCAGATGAAAGAGCTCGTTCCGTGGAATGCGCTGTGCGAAGAAATCGCCCCGCACTATCCCAAGGCAGGCAATGGGCGTCCGCCCATCGGACTGGAACGGATGCTGCGCATCCACTTCATCCAGCACTGGTTCAACCTTGCCGACCTGGCCTGCGAAGAAGCCCTCTACGACAGCGCCAGCCTGCGCCGCTTTGTCGGTATCGACCTGGGTCGCGAGCCTGTGCCGGACGCCACCACCCTGCTCAAGTTCCGCCGCCTGCTCAATGCACACGACCTGGGCGAAGCCCTGTTCGTGCGCGTGGCTCAAGAACTTCAGGCACAAGGCATCAAGATCAACACGGGCACCATCGTGGACGCCACGATCATTGGCGCCCCGAGTTCCACCAAGAATGCCGACCGCGCACGCGACCCCGAGATGCATCAGACGAAGAAAGGTCAGCAGTGGTACTTCGGCATGAAACTGCATATTGGCGTGGATAGCCAAAGCGGGTTGACTCACAGCGCGGTGGTGACTGCCGCCAACGTGCATGAC
PROTEIN sequence
Length: 208
MMKQQTLAMAADQETGFAAYRKPTRRDEFLRQMKELVPWNALCEEIAPHYPKAGNGRPPIGLERMLRIHFIQHWFNLADLACEEALYDSASLRRFVGIDLGREPVPDATTLLKFRRLLNAHDLGEALFVRVAQELQAQGIKINTGTIVDATIIGAPSSTKNADRARDPEMHQTKKGQQWYFGMKLHIGVDSQSGLTHSAVVTAANVHD