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SCNpilot_expt_500_p_scaffold_57265_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(5..1000)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor id=12497753 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 647
  • Evalue 8.60e-183
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 331.0
  • Bit_score: 601
  • Evalue 1.70e-169
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 332.0
  • Bit_score: 612
  • Evalue 4.30e-172

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GACCTCGACGATGCCGGCTTCCTCACCCAGCCGCTCGATGACATCGTCGCCACGCTGCACGCCGAGATCGAGGAGCTCGAACCCGAAGAGCTCGAAACCGCACTCAAGCACCTGCAGAACATGGACCCGACCGGCGTCGGCGCGCGCAATCTGTCCGAATGCCTGACCCTGCAGCTGCGCGCCCTGCCGGCCGACACCCCGGCACGCGATGCCGCCATGCGGCTGACCGCGCATTACCTTGATCTCCTTGCCGCGCGCGACGTCGGCAAACTGAAAAAAATGCTCGGCATCGACGACGCGACACTCCGTGCCGCCCGCATGCTCATCCTCTCGATGAATCCCCGCCCGGGGTCTGCATTCAGCGCCGACGAAACGCATTACGTCATTCCCGACGTATACGTGCGCAAGATCAAGGGCATGTGGATCGCCAGCCTCAACGCCGACGCCATGCCCAAGCTGCGCGTCAATCGCGTGTACGCGGACATCCTGGCGCGCCACCGCGAATCCGGCGGCAGCCAGCTCGCCAGCCAGTTGCAGGAAGCGCGCTGGCTGATCAAGAACGTGCAGCAGCGCTTCGACACCATCCTGCGCGTTTCACAGGCCATCGTCGACCGGCAGAAGCACTTCTTCGAGCACGGCGAAGTCGCCATGCGCCCGCTGGTATTGCGCGAGATCGCCGACGCCGTCGAGCTGCACGAATCGACCATCTCGCGCGTCACCACGCAGAAGTACATGATGACGCCGCGCGGCCTGTACGAACTGAAATACTTCTTCGGCAGCCACGTCGCCACCGACAATGGCGGCGCCTGTTCCTCAACCGCGATCCGCGCGCTGATCAAGCAGCTCGTGGCCGCCGAAAATGGCAAAAAACCGCTGTCCGACGGCCAGCTTGCCGAAGTGCTTGGCCAGCAGGGCATCGTCGTCGCCCGCCGCACTGTCGCGAAATACCGCGAATCGCTGCAGATTCCGCCCGCCAACATGCGCCGCACGCTTTGA
PROTEIN sequence
Length: 332
DLDDAGFLTQPLDDIVATLHAEIEELEPEELETALKHLQNMDPTGVGARNLSECLTLQLRALPADTPARDAAMRLTAHYLDLLAARDVGKLKKMLGIDDATLRAARMLILSMNPRPGSAFSADETHYVIPDVYVRKIKGMWIASLNADAMPKLRVNRVYADILARHRESGGSQLASQLQEARWLIKNVQQRFDTILRVSQAIVDRQKHFFEHGEVAMRPLVLREIADAVELHESTISRVTTQKYMMTPRGLYELKYFFGSHVATDNGGACSSTAIRALIKQLVAAENGKKPLSDGQLAEVLGQQGIVVARRTVAKYRESLQIPPANMRRTL*