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SCNpilot_BF_INOC_Burkholderiales_67_9

SCNPILOT_EXPT_500_P_Burkholderiales_67_3
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 3.25 Longest contig: 3.91 Kbp Bin length: 164.64 Kbp GC content: 67.48 %
Contigs count: 128 Features count: 259 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 1 / 55 BSCG 1 / 51 ASCG 2 / 38
Displaying items 51-100 of 128 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_28965
Species: BJP_08E140C01_10KDA_Burkholderiales_65_51 (50%)
2 1837 bp 67.94 2.45 95.05
SCNpilot_expt_500_p_scaffold_46114
Species: Rhodopirellula europaea (50%)
2 1205 bp 66.56 1.66 89.38
SCNpilot_expt_500_p_scaffold_43863
Species: GWE1_Burkholderiales_65_30_curated (50%)
2 1258 bp 70.03 2.78 87.28
SCNpilot_expt_500_p_scaffold_49064
Species: Alicycliphilus denitrificans (50%)
2 1142 bp 72.42 5.25 97.20
SCNpilot_expt_500_p_scaffold_55715
Species: Acidovorax avenae (50%)
2 1025 bp 70.93 2.44 100.39
SCNpilot_expt_500_p_scaffold_55971
Species: Acidovorax delafieldii (50%)
2 1022 bp 66.14 2.20 82.49
SCNpilot_expt_500_p_scaffold_44768
Species: Acidovorax sp. MR-S7 (50%)
2 1236 bp 69.90 1.62 99.76
SCNpilot_expt_500_p_scaffold_53962
Species: Afipia broomeae (50%)
2 1054 bp 56.36 2.85 87.67
SCNpilot_expt_500_p_scaffold_54394
Species: Alicycliphilus sp. B1 (50%)
2 1047 bp 71.63 3.34 91.98
SCNpilot_expt_500_p_scaffold_44537
Species: Hylemonella gracilis (50%)
2 1242 bp 70.45 3.22 92.51
SCNpilot_expt_500_p_scaffold_45712
Species: Ramlibacter tataouinensis (50%)
2 1214 bp 68.04 1.00 98.85
SCNpilot_expt_500_p_scaffold_37183
Species: Xylella fastidiosa (50%)
2 1460 bp 61.44 5.65 73.97
SCNpilot_expt_500_p_scaffold_50390
Species: Acidovorax sp. CF316 (100%)
2 1117 bp 69.02 1.34 87.82
SCNpilot_expt_500_p_scaffold_48199
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)
2 1160 bp 71.12 1.72 100.09
SCNpilot_expt_500_p_scaffold_38577
Species: GWF2_Lentisphaerae_49_21_curated (50%)
2 1411 bp 60.67 1.77 100.14
SCNpilot_expt_500_p_scaffold_44296
Species: RLO_Burkholderiales_65_40 (50%)
2 1247 bp 65.12 3.01 97.19
SCNpilot_expt_500_p_scaffold_52442
Species: R_Burkholderiales_67_14 (50%)
2 1079 bp 53.85 2.32 98.70
SCNpilot_expt_500_p_scaffold_44046
Species: Cupriavidus metallidurans (50%)
2 1253 bp 54.35 5.59 96.01
SCNpilot_expt_500_p_scaffold_47232
Species: Polaromonas sp. JS666 (50%)
2 1180 bp 66.19 3.81 93.81
SCNpilot_expt_500_p_scaffold_51906
Species: Cupriavidus pinatubonensis (50%)
2 1089 bp 66.39 3.21 96.69
SCNpilot_expt_500_p_scaffold_42794
Species: Acidovorax avenae (50%)
2 1285 bp 72.14 3.50 89.18
SCNpilot_expt_500_p_scaffold_51396
Species: Acidovorax sp. MR-S7 (50%)
2 1099 bp 67.42 2.27 68.24
SCNpilot_expt_500_p_scaffold_29120
Species: Hylemonella gracilis (50%)
2 1827 bp 69.29 2.87 88.83
SCNpilot_expt_500_p_scaffold_44313
Species: Acidovorax sp. KKS102 (50%)
2 1247 bp 69.61 1.60 100.32
SCNpilot_expt_500_p_scaffold_44065
Species: Rubrivivax gelatinosus (50%)
2 1253 bp 67.92 4.59 70.15
SCNpilot_expt_500_p_scaffold_27299
Species: RLO_Burkholderiales_65_40 (50%)
2 1938 bp 66.98 2.06 89.32
SCNpilot_expt_500_p_scaffold_53260
Species: Acidovorax ebreus (50%)
2 1066 bp 68.39 1.64 79.64
SCNpilot_expt_500_p_scaffold_47253
Species: BJP_08E140C01_Xanthomonadales_64_42 (50%)
2 1180 bp 58.73 1.91 92.54
SCNpilot_expt_500_p_scaffold_35946
Species: R_Burkholderiales_61_11 (50%)
2 1507 bp 68.28 2.99 93.56
SCNpilot_expt_500_p_scaffold_45242
Species: RLO_Burkholderiales_65_40 (100%)
2 1224 bp 59.07 2.04 96.08
SCNpilot_expt_500_p_scaffold_56102
Species: Acidovorax sp. CF316 (50%)
2 1020 bp 71.37 2.45 88.24
SCNpilot_expt_500_p_scaffold_41376
Species: Delftia acidovorans (50%)
2 1324 bp 62.54 4.91 94.03
SCNpilot_expt_500_p_scaffold_50946
Species: Acidovorax ebreus (50%)
2 1107 bp 69.74 1.36 89.97
SCNpilot_expt_500_p_scaffold_57388
Species: Acidovorax avenae (50%)
2 1000 bp 64.80 2.50 84.00
SCNpilot_expt_500_p_scaffold_51174
Species: Delftia sp. Cs1-4 (50%)
2 1103 bp 72.71 1.00 97.91
SCNpilot_expt_500_p_scaffold_54475
Species: R_Burkholderiales_67_14 (50%)
2 1045 bp 50.53 4.07 97.03
SCNpilot_expt_500_p_scaffold_49443
Species: Tolypothrix campylonemoides (50%)
2 1135 bp 65.99 1.32 83.26
SCNpilot_expt_500_p_scaffold_49702
Species: RLO_Burkholderiales_65_40 (100%)
2 1130 bp 65.49 1.33 88.14
SCNpilot_expt_500_p_scaffold_42097
Species: Pseudomonas alcaligenes (50%)
2 1304 bp 61.73 3.07 69.48
SCNpilot_expt_500_p_scaffold_54514
Species: BJP_08E140C01_Burkholderiales_65_30 (50%)
2 1045 bp 67.75 1.44 80.38
SCNpilot_expt_500_p_scaffold_49979
Species: GWE1_Burkholderiales_65_30_curated (50%)
2 1125 bp 74.93 1.56 88.00
SCNpilot_expt_500_p_scaffold_52542
Species: Burkholderia cepacia (50%)
2 1077 bp 58.59 2.32 63.51
SCNpilot_expt_500_p_scaffold_49222
Species: Acidovorax avenae (50%)
2 1140 bp 75.96 1.75 99.47
SCNpilot_expt_500_p_scaffold_45576
Species: Polaromonas sp. CF318 (50%)
2 1217 bp 62.61 1.64 96.38
SCNpilot_expt_500_p_scaffold_48063
Species: Acidovorax sp. NO-1 (50%)
2 1163 bp 69.91 1.07 94.15
SCNpilot_expt_500_p_scaffold_47600
Species: Rhodoferax ferrireducens (50%)
2 1173 bp 71.87 2.56 87.47
SCNpilot_expt_500_p_scaffold_26259
Species: Comamonas testosteroni (50%)
2 2007 bp 68.76 1.74 97.46
SCNpilot_expt_500_p_scaffold_55373
Species: Acidovorax citrulli (100%)
1 1031 bp 73.04 1.00 82.93
SCNpilot_expt_500_p_scaffold_45082
Species: RLO_Burkholderiales_65_40 (100%)
1 1228 bp 70.44 2.85 94.54
SCNpilot_expt_500_p_scaffold_54295
Species: Bordetella petrii (100%)
1 1048 bp 63.55 6.20 99.62
Displaying items 51-100 of 128 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.