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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_P_Proteobacteria_68_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.31 Longest contig: 2.50 Kbp Bin length: 758.00 Kbp GC content: 68.12 %
Contigs count: 596 Features count: 1082 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Displaying items 151-200 of 596 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_44475
Species: RBG_16_Armatimonadetes_67_12_curated (50%)
2 1243 bp 65.25 3.22 83.27
SCNpilot_expt_500_p_scaffold_53667
Species: Sorangium cellulosum (50%)
2 1059 bp 69.78 1.42 99.72
SCNpilot_expt_500_p_scaffold_50572 2 1114 bp 67.41 1.80 82.68
SCNpilot_expt_500_p_scaffold_32646
Species: Sorangium cellulosum (50%)
2 1647 bp 67.82 1.82 80.51
SCNpilot_expt_500_p_scaffold_51309
Species: Chondromyces apiculatus (50%)
2 1100 bp 69.82 1.36 84.00
SCNpilot_expt_500_p_scaffold_48639
Species: Sandaracinus amylolyticus (50%)
2 1151 bp 67.94 3.48 88.62
SCNpilot_expt_500_p_scaffold_42456
Species: Cystobacter violaceus (50%)
2 1295 bp 64.17 1.00 57.68
SCNpilot_expt_500_p_scaffold_26322
Species: Sorangium cellulosum (50%)
2 2004 bp 66.12 2.74 88.47
SCNpilot_expt_500_p_scaffold_35587
Species: RBG_16_Actinobacteria_67_15_curated (50%)
2 1520 bp 67.89 1.32 76.97
SCNpilot_expt_500_p_scaffold_57277
Species: Cystobacter violaceus (50%)
2 1002 bp 68.86 2.00 99.40
SCNpilot_expt_500_p_scaffold_48390
Species: Sorangium cellulosum (50%)
2 1156 bp 68.60 2.38 86.16
SCNpilot_expt_500_p_scaffold_35850
Species: R_RIF_OD1_12_45_11c (50%)
2 1510 bp 70.99 2.65 98.94
SCNpilot_expt_500_p_scaffold_55441
Species: Sorangium cellulosum (50%)
2 1029 bp 72.50 3.40 85.13
SCNpilot_expt_500_p_scaffold_44746
Species: marine sediment metagenome (50%)
2 1236 bp 67.80 1.21 98.54
SCNpilot_expt_500_p_scaffold_43347
Species: Roseivivax isoporae (50%)
2 1272 bp 67.53 2.56 68.40
SCNpilot_expt_500_p_scaffold_54611
Species: Anaeromyxobacter sp. Fw109-5 (50%)
2 1043 bp 69.51 1.00 84.28
SCNpilot_expt_500_p_scaffold_54356
Species: Plesiocystis pacifica (50%)
2 1047 bp 70.20 2.39 98.28
SCNpilot_expt_500_p_scaffold_23742
Species: Streptococcus canis (50%)
2 2201 bp 67.65 2.73 85.05
SCNpilot_expt_500_p_scaffold_39630 2 1376 bp 67.08 3.27 56.47
SCNpilot_expt_500_p_scaffold_54869
Species: Chondromyces apiculatus (50%)
2 1039 bp 68.91 1.00 100.19
SCNpilot_expt_500_p_scaffold_33950
Species: Sorangium cellulosum (50%)
2 1588 bp 68.45 3.94 94.27
SCNpilot_expt_500_p_scaffold_45407
Species: Ophiocordyceps sinensis (50%)
2 1221 bp 71.09 3.28 99.02
SCNpilot_expt_500_p_scaffold_38777 2 1403 bp 67.28 4.28 96.65
SCNpilot_expt_500_p_scaffold_57289 2 1001 bp 67.73 3.50 70.43
SCNpilot_expt_500_p_scaffold_54105
Species: Sandaracinus amylolyticus (50%)
2 1052 bp 69.96 3.09 84.13
SCNpilot_expt_500_p_scaffold_40306
Species: Sorangium cellulosum (50%)
2 1356 bp 67.48 2.95 103.10
SCNpilot_expt_500_p_scaffold_48915
Species: Cystobacter violaceus (50%)
2 1145 bp 66.29 1.75 77.03
SCNpilot_expt_500_p_scaffold_42219
Species: Aequorivita sublithincola (50%)
2 1301 bp 68.79 2.69 92.70
SCNpilot_expt_500_p_scaffold_53691
Species: Sandaracinus amylolyticus (50%)
2 1058 bp 66.73 1.89 100.38
SCNpilot_expt_500_p_scaffold_42222
Species: Cystobacter fuscus (50%)
2 1301 bp 70.25 2.69 95.00
SCNpilot_expt_500_p_scaffold_46129
Species: Sorangium cellulosum (50%)
2 1204 bp 68.27 1.25 79.73
SCNpilot_expt_500_p_scaffold_51594
Species: Tolypothrix campylonemoides (50%)
2 1095 bp 70.50 4.11 84.11
SCNpilot_expt_500_p_scaffold_35356
Species: Streptomyces sp. NRRL S-104 (50%)
2 1529 bp 69.91 1.47 100.07
SCNpilot_expt_500_p_scaffold_48156
Species: Sorangium cellulosum (50%)
2 1161 bp 70.28 1.29 75.71
SCNpilot_expt_500_p_scaffold_34015
Species: Sorangium cellulosum (50%)
2 1585 bp 67.38 2.21 88.39
SCNpilot_expt_500_p_scaffold_46647
Species: Sorangium cellulosum (50%)
2 1193 bp 70.58 2.10 93.29
SCNpilot_expt_500_p_scaffold_46392
Species: Sorangium cellulosum (50%)
2 1199 bp 67.14 1.00 98.83
SCNpilot_expt_500_p_scaffold_49584 2 1133 bp 66.46 4.41 74.67
SCNpilot_expt_500_p_scaffold_51857
Species: R_Burkholderiales_63_240 (50%)
2 1090 bp 66.88 1.00 81.74
SCNpilot_expt_500_p_scaffold_57050
Species: Sorangium cellulosum (100%)
2 1005 bp 64.38 2.99 100.00
SCNpilot_expt_500_p_scaffold_34020
Species: Sorangium cellulosum (100%)
2 1585 bp 66.18 3.47 82.90
SCNpilot_expt_500_p_scaffold_52659
Species: Hyalangium minutum (50%)
2 1075 bp 66.51 2.33 80.09
SCNpilot_expt_500_p_scaffold_38285
Species: Hyalangium minutum (50%)
2 1421 bp 67.63 2.99 78.54
SCNpilot_expt_500_p_scaffold_46140
Species: Nitrosospira lacus (50%)
2 1204 bp 68.19 1.00 99.42
SCNpilot_expt_500_p_scaffold_39142
Species: Chondromyces apiculatus (50%)
2 1392 bp 66.59 2.87 79.74
SCNpilot_expt_500_p_scaffold_38542
Species: Sandaracinus amylolyticus (50%)
2 1412 bp 68.06 1.42 100.07
SCNpilot_expt_500_p_scaffold_47701
Species: Chondromyces apiculatus (50%)
2 1170 bp 70.00 1.28 96.41
SCNpilot_expt_500_p_scaffold_44262
Species: Sorangium cellulosum (50%)
2 1248 bp 64.26 1.00 84.38
SCNpilot_expt_500_p_scaffold_26872
Species: Sorangium cellulosum (50%)
2 1967 bp 68.78 2.54 100.20
SCNpilot_expt_500_p_scaffold_39914
Species: Myxococcus fulvus (50%)
2 1367 bp 69.50 2.93 81.20
Displaying items 151-200 of 596 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.