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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_P_Proteobacteria_68_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.31 Longest contig: 2.50 Kbp Bin length: 758.00 Kbp GC content: 68.12 %
Contigs count: 596 Features count: 1082 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Displaying items 351-400 of 596 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_40953 2 1336 bp 68.49 4.12 62.43
SCNpilot_expt_500_p_scaffold_57170 2 1003 bp 71.98 2.49 66.40
SCNpilot_expt_500_p_scaffold_50730
Species: Williamsia sp. D3 (50%)
2 1111 bp 67.69 1.35 59.95
SCNpilot_expt_500_p_scaffold_52268
Species: GWC2_Rokubacteria_70_16_curated (50%)
2 1082 bp 68.48 2.31 94.82
SCNpilot_expt_500_p_scaffold_26990
Species: Sorangium cellulosum (100%)
2 1959 bp 67.38 3.32 89.59
SCNpilot_expt_500_p_scaffold_39008 2 1396 bp 68.98 4.30 79.51
SCNpilot_expt_500_p_scaffold_55080 2 1035 bp 67.25 3.38 60.00
SCNpilot_expt_500_p_scaffold_33585
Species: Sorangium cellulosum (50%)
2 1604 bp 69.20 2.18 93.33
SCNpilot_expt_500_p_scaffold_45553
Species: Cystobacter fuscus (50%)
2 1218 bp 71.67 4.11 100.00
SCNpilot_expt_500_p_scaffold_45042
Species: Anaeromyxobacter sp. PSR-1 (50%)
2 1229 bp 66.88 1.63 80.07
SCNpilot_expt_500_p_scaffold_42107 2 1304 bp 63.88 2.68 41.64
SCNpilot_expt_500_p_scaffold_45555
Species: Sorangium cellulosum (50%)
2 1218 bp 69.70 2.46 84.73
SCNpilot_expt_500_p_scaffold_49717
Species: marine sediment metagenome (50%)
2 1130 bp 70.71 3.10 101.15
SCNpilot_expt_500_p_scaffold_47062
Species: Hyalangium minutum (50%)
2 1184 bp 65.63 1.69 100.08
SCNpilot_expt_500_p_scaffold_39272
Species: Chondromyces apiculatus (50%)
2 1388 bp 66.86 3.24 90.56
SCNpilot_expt_500_p_scaffold_33848 2 1592 bp 68.84 1.26 97.61
SCNpilot_expt_500_p_scaffold_36506
Species: Chondromyces apiculatus (50%)
2 1485 bp 66.46 1.00 77.98
SCNpilot_expt_500_p_scaffold_43761
Species: Myxococcus fulvus (50%)
2 1260 bp 66.51 2.78 79.52
SCNpilot_expt_500_p_scaffold_29203
Species: Sorangium cellulosum (100%)
2 1823 bp 66.43 2.74 74.55
SCNpilot_expt_500_p_scaffold_48043
Species: Sorangium cellulosum (50%)
2 1163 bp 67.33 2.15 99.05
SCNpilot_expt_500_p_scaffold_38421
Species: Chondromyces apiculatus (50%)
2 1417 bp 67.11 1.41 96.54
SCNpilot_expt_500_p_scaffold_45052 2 1229 bp 69.98 1.63 77.38
SCNpilot_expt_500_p_scaffold_53076
Species: Sorangium cellulosum (50%)
2 1068 bp 68.54 1.40 89.33
SCNpilot_expt_500_p_scaffold_48301
Species: Sorangium cellulosum (50%)
2 1158 bp 69.86 2.59 89.38
SCNpilot_expt_500_p_scaffold_32825
Species: Sorangium cellulosum (100%)
2 1638 bp 67.52 1.83 83.33
SCNpilot_expt_500_p_scaffold_41440 2 1323 bp 68.48 1.51 73.02
SCNpilot_expt_500_p_scaffold_51232
Species: Zhouia amylolytica (50%)
2 1102 bp 69.60 2.27 95.83
SCNpilot_expt_500_p_scaffold_45824
Species: Stigmatella aurantiaca (50%)
2 1211 bp 64.08 4.13 100.33
SCNpilot_expt_500_p_scaffold_49218 2 1140 bp 67.98 2.63 60.26
SCNpilot_expt_500_p_scaffold_52802
Species: RBG_16_Acidobacteria_70_10_curated (50%)
2 1073 bp 67.75 2.33 81.92
SCNpilot_expt_500_p_scaffold_34676
Species: CG_Delta_07 (50%)
2 1556 bp 68.51 1.00 96.40
SCNpilot_expt_500_p_scaffold_52548
Species: Sorangium cellulosum (50%)
2 1077 bp 68.62 1.86 99.16
SCNpilot_expt_500_p_scaffold_45573
Species: Chondromyces apiculatus (50%)
2 1217 bp 67.63 2.88 78.64
SCNpilot_expt_500_p_scaffold_49734
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1130 bp 71.24 3.54 87.61
SCNpilot_expt_500_p_scaffold_54527
Species: Sorangium cellulosum (50%)
2 1044 bp 69.25 1.44 89.94
SCNpilot_expt_500_p_scaffold_45831
Species: Chondromyces apiculatus (50%)
2 1211 bp 67.96 3.10 80.51
SCNpilot_expt_500_p_scaffold_46800
Species: Cystobacter fuscus (50%)
2 1190 bp 68.82 2.52 98.82
SCNpilot_expt_500_p_scaffold_42897
Species: RBG_13_Deltaproteobacteria_61_14_curated (50%)
2 1283 bp 70.46 1.00 95.87
SCNpilot_expt_500_p_scaffold_43266
Species: Sorangium cellulosum (50%)
2 1274 bp 66.33 3.53 99.14
SCNpilot_expt_500_p_scaffold_41452
Species: Sandaracinus amylolyticus (50%)
2 1322 bp 69.82 3.03 83.96
SCNpilot_expt_500_p_scaffold_46036 2 1206 bp 71.48 2.90 54.98
SCNpilot_expt_500_p_scaffold_48828
Species: Chondromyces apiculatus (50%)
2 1147 bp 70.79 3.49 92.85
SCNpilot_expt_500_p_scaffold_55364
Species: Cystobacter violaceus (50%)
2 1031 bp 66.05 1.00 61.11
SCNpilot_expt_500_p_scaffold_34176
Species: Desulfovibrio africanus (50%)
2 1578 bp 69.07 1.58 96.96
SCNpilot_expt_500_p_scaffold_44159
Species: Sporocytophaga myxococcoides (50%)
2 1250 bp 69.04 1.00 64.08
SCNpilot_expt_500_p_scaffold_47344 2 1178 bp 69.78 1.00 90.15
SCNpilot_expt_500_p_scaffold_54792
Species: Dehalogenimonas lykanthroporepellens (50%)
2 1040 bp 66.73 1.00 64.33
SCNpilot_expt_500_p_scaffold_45842
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1211 bp 70.69 2.48 100.33
SCNpilot_expt_500_p_scaffold_33620
Species: Sulfobacillus acidophilus (50%)
2 1603 bp 66.31 2.81 91.89
SCNpilot_expt_500_p_scaffold_56700
Species: Sorangium cellulosum (100%)
2 1010 bp 70.59 2.48 99.50
Displaying items 351-400 of 596 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.