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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_P_Proteobacteria_68_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.31 Longest contig: 2.50 Kbp Bin length: 758.00 Kbp GC content: 68.12 %
Contigs count: 596 Features count: 1082 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 2 / 55 BSCG 3 / 51 ASCG 1 / 38
Displaying items 1-50 of 596 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_51872
Order: Burkholderiales (50%)
4 1089 bp 68.96 2.30 111.57
SCNpilot_expt_500_p_scaffold_46046
Species: Enhygromyxa salina (50%)
2 1206 bp 68.16 4.56 108.21
SCNpilot_expt_500_p_scaffold_54905
Species: Mycobacterium vulneris (50%)
2 1038 bp 66.96 1.93 104.91
SCNpilot_expt_500_p_scaffold_40306
Species: Sorangium cellulosum (50%)
2 1356 bp 67.48 2.95 103.10
SCNpilot_expt_500_p_scaffold_54512
Phylum: Proteobacteria (100%)
3 1045 bp 67.85 1.44 102.77
SCNpilot_expt_500_p_scaffold_54455
Species: Sorangium cellulosum (50%)
2 1046 bp 70.55 2.87 102.39
SCNpilot_expt_500_p_scaffold_53046
Species: Polymorphum gilvum (50%)
2 1069 bp 68.38 1.00 101.87
SCNpilot_expt_500_p_scaffold_52839
Species: Myxococcus xanthus (50%)
2 1072 bp 69.87 3.73 101.87
SCNpilot_expt_500_p_scaffold_33289
Species: Actinoplanes missouriensis (50%)
2 1618 bp 68.23 3.40 101.42
SCNpilot_expt_500_p_scaffold_49717
Species: marine sediment metagenome (50%)
2 1130 bp 70.71 3.10 101.15
SCNpilot_expt_500_p_scaffold_29978
Species: Sorangium cellulosum (100%)
3 1780 bp 66.97 1.69 101.12
SCNpilot_expt_500_p_scaffold_54853
Order: Myxococcales (66.67%)
3 1039 bp 70.93 1.92 100.77
SCNpilot_expt_500_p_scaffold_57086
Species: Pyrinomonas methylaliphatogenes (50%)
2 1004 bp 66.43 1.99 100.70
SCNpilot_expt_500_p_scaffold_38114
Species: marine sediment metagenome (66.67%)
3 1427 bp 65.45 1.40 100.49
SCNpilot_expt_500_p_scaffold_53691
Species: Sandaracinus amylolyticus (50%)
2 1058 bp 66.73 1.89 100.38
SCNpilot_expt_500_p_scaffold_45824
Species: Stigmatella aurantiaca (50%)
2 1211 bp 64.08 4.13 100.33
SCNpilot_expt_500_p_scaffold_45842
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1211 bp 70.69 2.48 100.33
SCNpilot_expt_500_p_scaffold_53103
Species: Sorangium cellulosum (50%)
2 1068 bp 66.29 1.87 100.28
SCNpilot_expt_500_p_scaffold_52073
Species: Hyalangium minutum (50%)
2 1086 bp 66.85 2.76 100.28
SCNpilot_expt_500_p_scaffold_50809
Species: Sorangium cellulosum (50%)
2 1110 bp 69.01 1.35 100.27
SCNpilot_expt_500_p_scaffold_48332
Species: Chloroflexus aggregans (50%)
2 1158 bp 68.22 2.59 100.26
SCNpilot_expt_500_p_scaffold_46727
Species: Desulfovibrio africanus (50%)
2 1191 bp 67.84 1.68 100.25
SCNpilot_expt_500_p_scaffold_46466
Species: GWC2_RIF_CHLX_73_18_curated (50%)
2 1197 bp 69.59 1.25 100.25
SCNpilot_expt_500_p_scaffold_40276
Species: Caulobacter vibrioides (50%)
2 1356 bp 72.64 2.58 100.22
SCNpilot_expt_500_p_scaffold_38338
Species: Sandaracinus amylolyticus (50%)
2 1419 bp 71.04 3.17 100.21
SCNpilot_expt_500_p_scaffold_26872
Species: Sorangium cellulosum (50%)
2 1967 bp 68.78 2.54 100.20
SCNpilot_expt_500_p_scaffold_57411
Species: Rhodococcus equi (50%)
2 1000 bp 69.30 3.00 100.20
SCNpilot_expt_500_p_scaffold_35408
Species: Ilumatobacter coccineus (50%)
2 1527 bp 69.42 2.29 100.20
SCNpilot_expt_500_p_scaffold_55989
Species: Chlorobium sp. GBChlB (50%)
2 1021 bp 73.65 1.47 100.20
SCNpilot_expt_500_p_scaffold_54869
Species: Chondromyces apiculatus (50%)
2 1039 bp 68.91 1.00 100.19
SCNpilot_expt_500_p_scaffold_54317
Species: Sorangium cellulosum (50%)
2 1048 bp 67.37 2.39 100.19
SCNpilot_expt_500_p_scaffold_50397
Species: Ilumatobacter coccineus (50%)
2 1117 bp 67.95 3.13 100.18
SCNpilot_expt_500_p_scaffold_49936
Species: GWA2_Elusimicrobia_61_42_curated (50%)
2 1126 bp 65.99 2.22 100.18
SCNpilot_expt_500_p_scaffold_48280
Species: Sorangium cellulosum (50%)
2 1159 bp 64.88 3.02 100.17
SCNpilot_expt_500_p_scaffold_47795
Species: Corallococcus coralloides (50%)
2 1168 bp 69.01 2.14 100.17
SCNpilot_expt_500_p_scaffold_47265
Species: Crinalium epipsammum (50%)
2 1180 bp 67.29 1.69 100.17
SCNpilot_expt_500_p_scaffold_45733
Species: CG_Delta_07 (50%)
2 1213 bp 62.90 2.06 100.16
SCNpilot_expt_500_p_scaffold_44978
Species: Haliangium ochraceum (50%)
2 1231 bp 71.24 1.83 100.16
SCNpilot_expt_500_p_scaffold_44851
Species: Chondromyces apiculatus (50%)
2 1234 bp 71.15 2.43 100.16
SCNpilot_expt_500_p_scaffold_20622
Species: Gemmatimonas aurantiaca (66.67%)
3 2495 bp 68.74 4.41 100.16
SCNpilot_expt_500_p_scaffold_44082
Species: Ramlibacter tataouinensis (50%)
2 1252 bp 65.73 1.60 100.16
SCNpilot_expt_500_p_scaffold_41401
Species: Myxococcus stipitatus (50%)
2 1324 bp 67.30 2.27 100.15
SCNpilot_expt_500_p_scaffold_34999
Species: Sorangium cellulosum (50%)
2 1543 bp 71.55 1.13 100.13
SCNpilot_expt_500_p_scaffold_34222
Species: Haliangium ochraceum (50%)
2 1576 bp 64.91 3.49 100.13
SCNpilot_expt_500_p_scaffold_32875 2 1636 bp 66.44 2.44 100.12
SCNpilot_expt_500_p_scaffold_32107
Species: Chloroflexus aggregans (50%)
2 1672 bp 66.99 1.20 100.12
SCNpilot_expt_500_p_scaffold_53906 2 1055 bp 69.10 1.90 100.10
SCNpilot_expt_500_p_scaffold_49398
Species: Oscillochloris trichoides (50%)
2 1136 bp 64.61 1.76 100.09
SCNpilot_expt_500_p_scaffold_47062
Species: Hyalangium minutum (50%)
2 1184 bp 65.63 1.69 100.08
SCNpilot_expt_500_p_scaffold_46404
Species: uncultured bacterium A1Q1_fos_1807 (50%)
2 1199 bp 66.06 2.50 100.08
Displaying items 1-50 of 596 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.