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SCNPILOT_EXPT_750_P_Sphingobacteriia_41_24

SCNPILOT_EXPT_500_P_Sphingobacterium_40_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Sphingobacterium  →  Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Displaying items 51-100 of 273 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_53445
Species: Chryseobacterium formosense (50%)
2 1062 bp 40.21 1.00 76.84
SCNpilot_expt_500_p_scaffold_43397
Species: Sphingobacterium sp. 21 (100%)
1 1270 bp 42.20 1.57 77.24
SCNpilot_expt_500_p_scaffold_43128
Species: Sphingobacterium sp. ML3W (100%)
1 1277 bp 39.08 1.57 77.29
SCNpilot_expt_500_p_scaffold_46451
Species: Zobellia galactanivorans (50%)
2 1197 bp 35.67 2.09 77.44
SCNpilot_expt_500_p_scaffold_48233
Species: Niastella koreensis (50%)
2 1160 bp 37.07 1.00 77.59
SCNpilot_expt_500_p_scaffold_36195
Species: Sphingobacterium spiritivorum (66.67%)
3 1496 bp 39.04 1.00 77.81
SCNpilot_expt_500_p_scaffold_54619 3 1043 bp 36.72 1.92 77.95
SCNpilot_expt_500_p_scaffold_50893
Species: Sphingobacterium spiritivorum (50%)
2 1108 bp 41.43 1.35 77.98
SCNpilot_expt_500_p_scaffold_24478
Phylum: Bacteroidetes (66.67%)
3 2141 bp 37.18 2.34 78.19
SCNpilot_expt_500_p_scaffold_43765
Species: Sphingobacterium spiritivorum (100%)
2 1260 bp 42.06 1.00 78.33
SCNpilot_expt_500_p_scaffold_34440
Species: Flavobacterium hibernum (50%)
2 1567 bp 38.10 2.23 78.49
SCNpilot_expt_500_p_scaffold_53340
Domain: Bacteria (50%)
4 1064 bp 38.72 1.88 79.23
SCNpilot_expt_500_p_scaffold_53406
Species: Sphingobacterium sp. ML3W (50%)
2 1063 bp 39.13 1.88 79.30
SCNpilot_expt_500_p_scaffold_36997
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1467 bp 35.45 2.04 79.75
SCNpilot_expt_500_p_scaffold_50209
Species: Sphingobacterium sp. ML3W (50%)
2 1120 bp 40.36 1.34 79.82
SCNpilot_expt_500_p_scaffold_45890
Species: Sphingobacterium sp. ML3W (50%)
2 1210 bp 39.92 1.00 79.83
SCNpilot_expt_500_p_scaffold_51080
Species: Sphingobacterium sp. ML3W (100%)
2 1104 bp 41.21 1.00 79.89
SCNpilot_expt_500_p_scaffold_35265
Species: Sphingobacterium spiritivorum (50%)
2 1533 bp 41.68 2.61 80.23
SCNpilot_expt_500_p_scaffold_55409
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1030 bp 40.58 1.00 80.39
SCNpilot_expt_500_p_scaffold_46104
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1205 bp 35.44 2.07 80.41
SCNpilot_expt_500_p_scaffold_51167
Species: Pedobacter sp. BAL39 (100%)
1 1103 bp 42.52 1.81 80.51
SCNpilot_expt_500_p_scaffold_53467
Species: Niastella koreensis (50%)
2 1062 bp 42.00 1.88 80.51
SCNpilot_expt_500_p_scaffold_39566
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1378 bp 38.24 2.18 81.20
SCNpilot_expt_500_p_scaffold_53141
Species: Sphingobacterium sp. ML3W (100%)
1 1067 bp 35.80 1.87 81.26
SCNpilot_expt_500_p_scaffold_56080
Species: Sphingobacterium sp. ML3W (100%)
2 1020 bp 39.90 3.43 81.47
SCNpilot_expt_500_p_scaffold_57291
Species: Flavobacterium enshiense (100%)
1 1001 bp 34.67 1.00 81.52
SCNpilot_expt_500_p_scaffold_44617
Species: Firmicutes bacterium CAG:822 (50%)
2 1240 bp 45.73 2.42 81.53
SCNpilot_expt_500_p_scaffold_55718
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1025 bp 40.20 1.00 81.66
SCNpilot_expt_500_p_scaffold_41462
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1322 bp 36.84 2.27 81.92
SCNpilot_expt_500_p_scaffold_31177
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1719 bp 38.86 1.75 82.20
SCNpilot_expt_500_p_scaffold_50057
Species: Sphingobacterium spiritivorum (50%)
2 1123 bp 41.32 1.34 82.28
SCNpilot_expt_500_p_scaffold_55451
Species: Pseudopedobacter saltans (50%)
2 1029 bp 40.33 1.94 82.51
SCNpilot_expt_500_p_scaffold_30502 4 1754 bp 35.06 1.00 82.61
SCNpilot_expt_500_p_scaffold_38376
Species: Pseudopedobacter saltans (100%)
1 1418 bp 36.74 1.06 82.72
SCNpilot_expt_500_p_scaffold_53181
Species: Sphingobacterium spiritivorum (50%)
2 1067 bp 36.46 2.81 83.22
SCNpilot_expt_500_p_scaffold_40841
Species: Sphingobacterium spiritivorum (100%)
1 1340 bp 38.51 1.87 83.51
SCNpilot_expt_500_p_scaffold_56093
Species: Sphingobacterium sp. ACCC 05744 (50%)
2 1020 bp 44.31 1.00 83.53
SCNpilot_expt_500_p_scaffold_38234
Genus: Sphingobacterium (66.67%)
3 1423 bp 36.05 1.93 83.70
SCNpilot_expt_500_p_scaffold_43576
Species: Sphingobacterium sp. ACCC 05744 (100%)
2 1265 bp 34.94 1.19 84.19
SCNpilot_expt_500_p_scaffold_43214
Species: marine sediment metagenome (100%)
1 1275 bp 40.86 1.96 84.24
SCNpilot_expt_500_p_scaffold_55553
Species: Sphingobacterium sp. ML3W (100%)
1 1028 bp 34.34 1.46 84.34
SCNpilot_expt_500_p_scaffold_51222 1 1102 bp 38.66 1.36 84.66
SCNpilot_expt_500_p_scaffold_48452
Species: Sphingobacterium sp. PM2-P1-29 (100%)
3 1155 bp 39.05 1.95 84.94
SCNpilot_expt_500_p_scaffold_28609
Genus: Sphingobacterium (66.67%)
3 1858 bp 36.06 1.61 85.09
SCNpilot_expt_500_p_scaffold_43018
Species: Chryseobacterium gleum (50%)
2 1280 bp 33.44 1.56 85.31
SCNpilot_expt_500_p_scaffold_54552
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1044 bp 40.80 1.44 85.63
SCNpilot_expt_500_p_scaffold_50981
Species: Sphingobacterium sp. ML3W (50%)
2 1106 bp 39.60 2.26 85.71
SCNpilot_expt_500_p_scaffold_35541
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1522 bp 38.76 1.00 85.74
SCNpilot_expt_500_p_scaffold_47933 2 1165 bp 34.33 2.15 85.75
SCNpilot_expt_500_p_scaffold_43016
Species: Chryseobacterium vrystaatense (100%)
1 1280 bp 35.55 2.73 86.02
Displaying items 51-100 of 273 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.