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SCNpilot_expt_500_p_scaffold_3475_8

Organism: SCNPILOT_EXPT_500_P_Flavobacterium_38_9

partial RP 10 / 55 MC: 1 BSCG 10 / 51 ASCG 6 / 38
Location: 8015..9214

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034B4C78 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 369.0
  • Bit_score: 574
  • Evalue 1.10e-160
  • rbh
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53459.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 369.0
  • Bit_score: 579
  • Evalue 2.80e-162
MATE efflux family protein; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 369.0
  • Bit_score: 564
  • Evalue 2.10e-158
  • rbh

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Taxonomy

Flavobacterium hibernum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1200
GTGTGGAATTGTAGGATATGGTGCTATCTTTGCCACACAATTTTCTACACAATCGTGAACTTACAACAATACACCAAAGAATTTTCATATAACCTGAAATTAGCTTACCCTATTATTTTGGGTATGCTTGGCCATACACTAATAGGAATAGTCGATAATATAATGGTAGGCAAATTGGGTGCTGCCGAATTAGCTGCCGTTTCACTTGGAAACAGCTTTATTTTTATTGCAATTTCCTTAGGTATTGGTTTCTCGACAGCCATTACGCCTATCATTGCGCAGGCTGATGCAGAAAAGGATAATATAAAGATAAGGTCGGCTTTTCACCACGGTTTATTTTTGTGTGGCATCTTAGGGCTCACATTGTTTGGCGTTATCGTATTGGCAAAGCCGCTAATGTATTATATGGGGCAACCGGATGAAGTTATTGCTTTGGCAAAGCCGTATATTGATTGGGTCGCTTTTTCTTTAATCCCGATGGTTATTTACCAGGGATACAAACAATTTGCAGACGGGCTTTCAATGACAAAATATTCGATGTATGCCATTATTATGGCTAATGTTGTGCACGTGGTGTTGAACTACCTGCTCATATATGGAATATGGTTTTTTCCACGTATGGGCATTATTGGGGCGGCGCTGGGAACAGTTATTTCCAGAATTATGATGGTGGTGTTTATGCACATCATTTTATCTAAAAATGAAAAGCTGACTGCCTATTTCCAAAATTTCAGTTTTCAGGAACTTAAAAAATCCATGCTTAAAAAAATCATCGGTCTTGGATTGCCTTCGGCCATGCAGATGTTTTTTGAGGTAGCACTTTTCACAGCTGCTATCTGGCTTTCGGGGTCTTTGGGTAAAATCAGCCAGGCCGCCAACCAGATTGCTTTAAGTTTAGCTTCGGCAACTTTTATGTTTGCGATGGGATTGAGCGTAACCGCCATGATTCGTGTGAGCAACCAGAAAGGATTGAAAGACTATAAAAAACTGCTGGTAGTTGCCCGTTCGATTTTTCTTCTGGCAATTATAATTGAGGTCGTATTTGCAATAGGATTTGTACTTTTCCATCAATTCTTACCGCATTTGTTCCTCAATATGGAAAATAGCGCCTTGCTTATTGACAATGAAGAAGTAATAGCTATTGCTGCCAAACTATTACTGTGGCTGCCGTGTTCCAGATTTCTGACGGAATACAGGTAG
PROTEIN sequence
Length: 400
VWNCRIWCYLCHTIFYTIVNLQQYTKEFSYNLKLAYPIILGMLGHTLIGIVDNIMVGKLGAAELAAVSLGNSFIFIAISLGIGFSTAITPIIAQADAEKDNIKIRSAFHHGLFLCGILGLTLFGVIVLAKPLMYYMGQPDEVIALAKPYIDWVAFSLIPMVIYQGYKQFADGLSMTKYSMYAIIMANVVHVVLNYLLIYGIWFFPRMGIIGAALGTVISRIMMVVFMHIILSKNEKLTAYFQNFSFQELKKSMLKKIIGLGLPSAMQMFFEVALFTAAIWLSGSLGKISQAANQIALSLASATFMFAMGLSVTAMIRVSNQKGLKDYKKLLVVARSIFLLAIIIEVVFAIGFVLFHQFLPHLFLNMENSALLIDNEEVIAIAAKLLLWLPCSRFLTEYR*