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SCNpilot_expt_500_p_scaffold_2500_3

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: comp(3145..3687)

Top 3 Functional Annotations

Value Algorithm Source
ISE/inbred ISE genomic scaffold, scaffold_pathogens_Hcontortus_scaffold_378 n=1 Tax=Haemonchus contortus RepID=U6PI30_HAECO similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 158.0
  • Bit_score: 81
  • Evalue 1.30e-12
ISE/inbred ISE genomic scaffold, scaffold_pathogens_Hcontortus_scaffold_378 {ECO:0000313|EMBL:CDJ91088.1}; TaxID=6289 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus.;" source="Haemonchus contortus (Barber pole worm).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.3
  • Coverage: 158.0
  • Bit_score: 81
  • Evalue 1.90e-12
uncharacterized LOC100219403; K14822 rRNA-processing protein CGR1 similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 178.0
  • Bit_score: 76
  • Evalue 1.40e-11

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Taxonomy

Haemonchus contortus → Haemonchus → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 543
TTGAATTTCTATATTTTCTCATTCTTTTTTTTTAAAAAAATTAATATAAAACAAACTAGATCCGATTTTGGAAAACAAGTTTCTTTAAATTCAAAATTAGAAGGAGAAAATGTTGATGAAAATGCTCAAGAAACTTCTCAAGCAAATGAAAATCAAGATGTTGAAGAAAAGGATAAAAAGAAGAAAAAAAAGGAAAAGAAAGAGAAAAAAGAGAAGAAAAAAGATAAAAAGAAGGAGAAGAAAGAGAAGAAAGAAAAAAAGGATAAAGATGATCATGAAGATAAAGATCGAGACTATGAAAGAGATAGAGAAAAGGACAGAGAAAGAGATCGAGACAGGGATAGGGATAGGGATAGGGAAAGAGACAGAGATAGAGATAGGGACAGAGATAGAGATAGAGATAGAGATAGGGACAGAGACAGGGATAGGGAAAGAGAAAGATATTCAGATCGAGGAAGAGACAGAGATAGAGATTCAGATAGAGGAAGGCATCGTTCTCCTGAACATAGAAGAGATTCTCCATCCAAAAGACGTAGATATTAA
PROTEIN sequence
Length: 181
LNFYIFSFFFFKKINIKQTRSDFGKQVSLNSKLEGENVDENAQETSQANENQDVEEKDKKKKKKEKKEKKEKKKDKKKEKKEKKEKKDKDDHEDKDRDYERDREKDRERDRDRDRDRDRERDRDRDRDRDRDRDRDRDRDRDRERERYSDRGRDRDRDSDRGRHRSPEHRRDSPSKRRRY*