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SCNpilot_expt_500_p_scaffold_3371_2

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: 255..776

Top 3 Functional Annotations

Value Algorithm Source
DBP5; RNA helicase required for poly(A+) mRNA export; K01529 [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 165.0
  • Bit_score: 132
  • Evalue 1.50e-28
ATP-dependent RNA helicase DBP5; EC=3.6.4.13;; TaxID=322104 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces.;" source="Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /; NRRL Y-11545) (Yeast) (Pichia stipitis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 165.0
  • Bit_score: 132
  • Evalue 6.80e-28
ATP-dependent RNA helicase DBP5 n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) RepID=DBP5_PICST similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 165.0
  • Bit_score: 132
  • Evalue 4.90e-28

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Taxonomy

Scheffersomyces stipitis → Scheffersomyces → Saccharomycetales → Saccharomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 522
ATGATTGCCCAATCTCAATCAGGAACAGGAAAGACAGCTGCATTTTCTTTAGCAATGCTTTCAAAAGTAAATAAAGATTCTCCACACCATCAAGCCCTCTGTTTAGCTCCTTCAAGAGAATTGGTTATTCAAATTGCTGAACAAATTTCTACAATGGGACAATTCACCGGAATTAAAATTGCAACTGTAATTCCTCAATCAAGTATTTTTTTTCTTTTTCTTTTTTTTTCCCTCCCTTTTTATATAGTTTATATACTCAAAATTCAAATACAAATAAATAAAGATGACTCATTGGAAGCTCAAATTCTTGTTGGAACTCCAGGAAAGGTCTTTGATTTGATCCAAAGAAGGAAAATTGCTACAAAAACTATTGTTGTGTTTGTTTTAGATGAAGCAGATATTATGATTGATTCTCAAGGATTAGGAGACCAATCACTTCGAATTAAGAAGTTTATTCTTTTCCTTTTTATTTTTTTATTTTTTTCCTTCTCCATTTTCATATCTAATCTTCAAAACAAATAA
PROTEIN sequence
Length: 174
MIAQSQSGTGKTAAFSLAMLSKVNKDSPHHQALCLAPSRELVIQIAEQISTMGQFTGIKIATVIPQSSIFFLFLFFSLPFYIVYILKIQIQINKDDSLEAQILVGTPGKVFDLIQRRKIATKTIVVFVLDEADIMIDSQGLGDQSLRIKKFILFLFIFLFFSFSIFISNLQNK*