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SCNpilot_expt_500_p_scaffold_3519_8

Organism: scnpilot_dereplicated_Eukaryote_unknown_9

partial RP 23 / 55 MC: 5 BSCG 11 / 51 MC: 4 ASCG 12 / 38 MC: 8
Location: comp(6884..7618)

Top 3 Functional Annotations

Value Algorithm Source
ercc6l, fc22h03, wu:fc22h03; si:ch211-278b8.3 (EC:3.6.4.12) similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 232.0
  • Bit_score: 190
  • Evalue 5.10e-46
DNA excision repair protein ERCC-6-like; EC=3.6.4.12;; ATP-dependent helicase ERCC6-like; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.;" source="Danio rerio (Zebrafish) (Brachydanio rerio).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 232.0
  • Bit_score: 190
  • Evalue 2.30e-45
DNA excision repair protein ERCC-6-like n=1 Tax=Danio rerio RepID=ERC6L_DANRE similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 232.0
  • Bit_score: 190
  • Evalue 1.60e-45

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Taxonomy

Danio rerio → Danio → Cypriniformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 735
ATGATTCGTTCTAATTTTGAAAAATTAACACTTAAAGGAGAACATGAATGGGATTATATTATTTTAGATGAAGGACACTTAATAAAGAATCCAAATTGTCAAATATCTCAATTATTAAGATCAATGAAATCAATCCATAGAATCATTTTAAGTGGAACCCCAGTTCAAAATAATTTAGGAGAACTTTGGGCATTATTTGATTTTTTAACAGATGGAGAATTATTTGGAAGTCAAAAAGATTTTAAATTAAATTATGAACATGCAATTGTTAAGGCAACAGATAGAGAAGCATCTCTTGAAGAAAAAGCAATGGGTGAAGCAATTGGACAAAATCTTCGTGAAGTTATTAAACCATTTTTACTTCGAAGAGAAAAGAAAACATTATTTGGAGAATCTCAAAAGGAAGAAAATAAAATAATTGAAGAATCAACAAAGAAAGAAAAGTCTAATGATTCTTGTAAAACAATGAATGATAAAAAGGAATCTGGACGTGAAAAATTAAATCTTCCAAAACTTGAATCTAAAAGAGAACTTATTGTTTGGAATTATCTTTCTGAAAAACAAATTGAACTTTATGATTCATTTTTAAATTCAGATGAAGTAAGTCAAGTATTAAATCAAAGTGCATCTCCTTTAGCTGCTTTACAAGTTTTAAATAGTATCTGTGATCATCCTGGTTTACTTTCAAAATCAACAGAAACTTGTGCCTCTTTACTTCTAAAACAATATCATTAG
PROTEIN sequence
Length: 245
MIRSNFEKLTLKGEHEWDYIILDEGHLIKNPNCQISQLLRSMKSIHRIILSGTPVQNNLGELWALFDFLTDGELFGSQKDFKLNYEHAIVKATDREASLEEKAMGEAIGQNLREVIKPFLLRREKKTLFGESQKEENKIIEESTKKEKSNDSCKTMNDKKESGREKLNLPKLESKRELIVWNYLSEKQIELYDSFLNSDEVSQVLNQSASPLAALQVLNSICDHPGLLSKSTETCASLLLKQYH*