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SCNpilot_expt_500_p_scaffold_686_curated_16

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(18133..18384)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein id=2037261 bin=GWD2_Bacteroidetes_33_33 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 72.0
  • Bit_score: 61
  • Evalue 3.90e-07
Helix-turn-helix domain protein id=2037261 bin=GWD2_Bacteroidetes_33_33 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 72.0
  • Bit_score: 61
  • Evalue 3.90e-07
Tax=GWD2_Bacteroidetes_33_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 72.0
  • Bit_score: 61
  • Evalue 5.50e-07

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Taxonomy

GWD2_Bacteroidetes_33_33_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 252
ATGATCAAAACTGACTACCTTCCGATCCTTGAAGAGATGAAAAGCATCGCGCCATTAATCCGACTTCATCGGAAAAAAGCAGGATTGAGCCAACAAGCTCTTGCAGACCTGGCTAGTGTTGCTCGACGAACGATTAGCAATATCGAAGATGCCGAAGCAACGGTACAACTTAATATTCTGTTAAAAGTTCTTAAAGCGCTTAACATGAGCCTTTATATCTCTGGGCCATTTATTACGGATAAAGAGCAATGA
PROTEIN sequence
Length: 84
MIKTDYLPILEEMKSIAPLIRLHRKKAGLSQQALADLASVARRTISNIEDAEATVQLNILLKVLKALNMSLYISGPFITDKEQ*