ggKbase home page

SCNpilot_expt_500_p_scaffold_263_curated_56

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 58606..59289

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1T6_PARAV similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 226.0
  • Bit_score: 292
  • Evalue 4.80e-76
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 448
  • Evalue 4.30e-123
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 227.0
  • Bit_score: 296
  • Evalue 8.00e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 684
GTGACTACGCTAAAAAAATTTAATTTAAACGGTGAAGAAGTTGGAGAAATCCAGATTGCTGATCACCTCGTTGACGTTGAGGTTAGCGGGCAAATGGTAAAGGATTATATCGTAGCTCTTCGTGCTAATGCAAGACAATGGTCTGCAAATACAAAAGGGCGTTCTGAAGTTAACCATACCACAAAAAAACCTCATCCACAAAAAGGTGGAGGACGTGCACGTCAAGGTTCCTTAGCAGCACCTCAATATAAAGGTGGGGGACGTGTATTTGGTCCAAAACCAAAATTTGACCAGCATGTTAAGATTAACGTAAGAGAAAAACGTGCAGCTATTCGCTTCCTCCTCAGTGAAAAAATTCGTGAAAATCGTATCCGTATTGTAGAAAATTTCCAATTAGATCAACCAAGAACTAAACAAGTGGCTGGTTTTTTAAAATCACAATCCATGAATGGTCGTGTTCTCTTTTTGGGTGAAGGTTCTTATGCAAACGTAATGATTGGCGACGAATCACAAAAAGTTTCTGTACAAGATAAAAAACATGAGAATTTTGTAAGAAGTGCTCGCAATATTCCAGGTGTTTCTTTTTCACTTGCAACAAACATCAGTGGATACGATGTTTTAGTAGCGCGTGAGCTTGTTATTACAGAAGCTGCATTGCAAGAAATAAACGAATGGTTGAGCTAA
PROTEIN sequence
Length: 228
VTTLKKFNLNGEEVGEIQIADHLVDVEVSGQMVKDYIVALRANARQWSANTKGRSEVNHTTKKPHPQKGGGRARQGSLAAPQYKGGGRVFGPKPKFDQHVKINVREKRAAIRFLLSEKIRENRIRIVENFQLDQPRTKQVAGFLKSQSMNGRVLFLGEGSYANVMIGDESQKVSVQDKKHENFVRSARNIPGVSFSLATNISGYDVLVARELVITEAALQEINEWLS*