ggKbase home page

scnpilot_expt_750_bf_scaffold_555_27

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 28898..29758

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Joostella marina DSM 19592 RepID=I3C6T9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 282.0
  • Bit_score: 339
  • Evalue 3.30e-90
  • rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EIJ39332.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 282.0
  • Bit_score: 339
  • Evalue 4.60e-90
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 286.0
  • Bit_score: 209
  • Evalue 1.50e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Joostella marina → Joostella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 861
ATGAAATCGTTGCAGCTATTTACAGATAAGGAAATCACCGTGAAGGAATTGGCATCTAATAATTCCGGCTTGCATAAACATCATTTTTTTGAACTCATATATGTTTTGGATGGCACCGGAATACATAATATTAATAACAACCGATTTGAATTTTCAAAGGGTGATGTTTTCCTGCTTACGCCGGAAGATGCGCACACCTTTGAAATAAGCACACCCACCAAATTCTGTATAGTAGATTTTACCAAAGGCTTTTTTGTGAAGAACCGCAGGGTTGGTGAAACGAAAGCCAATATCAGCGAATTGTATAAACAACTGGAATTTATCTTTCATAATCATCATAACGTTCAGGGCAGCATTGTATCCGATCCTGACAAACCGATATTCAAAGCACTGATCAACCAGTTGATCAAGGAGAAGGGCAAAAAACAATTCTTTGATGAGATCATTATCCAGGATATCATTTTTCTGCTGCTTCATTTCATTGCAAGAAATATACAGCAGAACATTTCACTATTTTCGAAAAGGGAAAACCCCAAAAGCAGGGTACATGAAATTACGGCATATATACAGCAGCACATTTACGATAGTGAATTACTAAAAATCAGCAGTATAGCCACTCATTTTGGCAAATCGACCGACCATCTAAACAGATATTTTAAGGCTGAGACGGAAAGCACGATTAAAGACTATATTATTCGCTACAAACTCAATTTAGTTACAACAAGGCTTAAATTCAGCGACTTGACCATATCGGAGATAGCAGGTGAATTGAATTTTACGGATGAGAGCCATCTAAACAAAATGTTTAAAAGCGCATTTGGTAAAACTGCCAAACAATATAAGAATGACCACAAACATTAA
PROTEIN sequence
Length: 287
MKSLQLFTDKEITVKELASNNSGLHKHHFFELIYVLDGTGIHNINNNRFEFSKGDVFLLTPEDAHTFEISTPTKFCIVDFTKGFFVKNRRVGETKANISELYKQLEFIFHNHHNVQGSIVSDPDKPIFKALINQLIKEKGKKQFFDEIIIQDIIFLLLHFIARNIQQNISLFSKRENPKSRVHEITAYIQQHIYDSELLKISSIATHFGKSTDHLNRYFKAETESTIKDYIIRYKLNLVTTRLKFSDLTISEIAGELNFTDESHLNKMFKSAFGKTAKQYKNDHKH*