ggKbase home page

scnpilot_expt_750_bf_scaffold_13291_9

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(3348..3623)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system coupling protein TraD n=1 Tax=uncultured bacterium RepID=K2FDQ0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 80.0
  • Bit_score: 98
  • Evalue 3.10e-18
conjugative transfer protein TraD Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 80.0
  • Bit_score: 98
  • Evalue 4.40e-18
conjugative transfer protein TraD similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 71.0
  • Bit_score: 84
  • Evalue 1.30e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
TCAAAAGTATTAGGAGAAAAGGATGAAACAGAAATTATTGAAAACCTTTCATATGGAGCGAATACCATTAGAGATGGTGTTTCTTTAAATCAGCAAACCCACACTAGGCCTATTGTAATTCCTACAGAAATCCAGAACCTTAAAGACCTTGAAGCATATATCAAACTCCCAGGCAATTATCCTATTACTAAGTTCAAGATGCCTTATCAGTCTCAACCACCAAGTAAAATCGAAACATTTGATTTTTCTTTGGCCAGAGGAGATGACCATGTCTGA
PROTEIN sequence
Length: 92
SKVLGEKDETEIIENLSYGANTIRDGVSLNQQTHTRPIVIPTEIQNLKDLEAYIKLPGNYPITKFKMPYQSQPPSKIETFDFSLARGDDHV*