ggKbase home page

scnpilot_expt_750_bf_scaffold_11888_8

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 3810..4811

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GPD1_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 335.0
  • Bit_score: 410
  • Evalue 2.30e-111
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 335.0
  • Bit_score: 410
  • Evalue 6.60e-112
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KFL25052.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 338.0
  • Bit_score: 410
  • Evalue 1.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
TTGAGTCCGCCGGTCGACATCGAGGCGGTCTACCGGGCCGAGGCGGGGCGCGTCCGGGCGACACTGATCCGGCTGCTCGGCGGGTTCGATACCGCCGAGGAAGCGCTGCACGACGCCTTCATGGCCGCCGCGGTGCAGTGGCCGGTGCGCGGCGTGCCCGACAATCCGCGTGCCTGGCTGGTCTCGGCCGGGCGCTTCAAGGCCATCGACCGGATGCGCCGGCGGGTCCGGCACGAGGCCGCGGTGGCCGAGCTGGGCCGGGACATGGAGGAGGCAATCGAGGATGAACCGATGGACGAGCAGTCGATTGCCGACGATCAGCTGCGGCTCATCTTCACCTGCTGCCATCCGGCGCTGGCGCCCGATGCGCAGGTGGCGCTGACGCTGCGCGAAATCTGCGGGCTCACCACCGAGCAGGTCGCGGCCGCCTTCGTCGTGCCGACGACGACGCTGGCGCAGCGCATCGTCCGCGCCAAAGGCAAGATCAGGGATGCCCGCATTCCCTATGCCGTGCCTGAGCGGGAGCAGCTGCCGGAGCGGCTGCATACGGTGCTCCACACCATCTATCTCGTCTTCAACGAGGGCTATTCGGCCCCGGCCGATGGAGCGGATCTTGCGGCGGAGGCCATTCGCCTCGGGCGTCTGCTGCTGCAGCTGATGCCGGCCACCGAGGTTGCAGGGCTACTGGCGCTGATGCTGCTCAACGAGTCGCGGCGGGCCGCACGTGTCGATGCCGATGGCGAGATCGTGCTGCTTTCCGCGCAGGATCGCGCGCTGTGGAACCGCGCGCAGATCGCGGAGGGCCTCGTGCTCGCGACGCGCGCCGGCACCGGTGGCGCTTTCGCGCTGCAGGCCGCGATCGCCGCCGTCCATGCGCAGGCGGAATTCCCGGCCGATACCGACTGGCGCCGCATCGCCACGCTCTATGGCGCTGTTCTCGCGCTCCAGCCCAATACCATCGTCGCGCTCAACCGCGCCGTCGCCATTGCCGAATGCGACGGT
PROTEIN sequence
Length: 334
LSPPVDIEAVYRAEAGRVRATLIRLLGGFDTAEEALHDAFMAAAVQWPVRGVPDNPRAWLVSAGRFKAIDRMRRRVRHEAAVAELGRDMEEAIEDEPMDEQSIADDQLRLIFTCCHPALAPDAQVALTLREICGLTTEQVAAAFVVPTTTLAQRIVRAKGKIRDARIPYAVPEREQLPERLHTVLHTIYLVFNEGYSAPADGADLAAEAIRLGRLLLQLMPATEVAGLLALMLLNESRRAARVDADGEIVLLSAQDRALWNRAQIAEGLVLATRAGTGGAFALQAAIAAVHAQAEFPADTDWRRIATLYGAVLALQPNTIVALNRAVAIAECDG