ggKbase home page

scnpilot_expt_750_bf_scaffold_15393_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(268..828)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VHP3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 183.0
  • Bit_score: 207
  • Evalue 1.30e-50
Uncharacterized protein {ECO:0000313|EMBL:CDS91884.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 183.0
  • Bit_score: 208
  • Evalue 8.00e-51
putative prophage LambdaCh01, repressor protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 185.0
  • Bit_score: 105
  • Evalue 1.90e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGAGCAACGTAGGCAACAATATTAAGAAATTAAGAAAAGTGAAAGGAATGAGTCAACAGGCATTTGGGGATATTTTTAATCTTACTAGAGGTAATATTTCGTCTTACGAAGAAATGCGTGCAGAGCCAAAAATTGAGATTGTTCTAAAGATTGCAAATTATTTTGGCATTCCTGTGCAGCATCTTATTGAAAAAAATCTATCTGTCAATGAAATTCTTAATTTCAATGATTATTTTGATCCAAATGTTTCTCTTATTGGACGTAAAAGACTGTTACAAATCCCGCTGCTGGAACGAGATGGTATTTTTGAGGCGGGTAGTTATTTTTCGAAATTAGAAGAGCTTCCAATAATTGAATTTCCTTTGCAAAGTAGGAACCGCCTCATCGCAATCGAATACGCTGACGCTATTCCGGTGCCGAGTGATTTTTTGGCTGGCCCTCAATCCATTTTATTTTTCGAAGAGGTAGATGTTCAGGGCCTACATACGTTGGATAAAGCATTTGGTTTGTATTTTTCCGAAGAAGAGTTCTTTATTGGAAAATACAGTTTGCAGGAATAG
PROTEIN sequence
Length: 187
MSNVGNNIKKLRKVKGMSQQAFGDIFNLTRGNISSYEEMRAEPKIEIVLKIANYFGIPVQHLIEKNLSVNEILNFNDYFDPNVSLIGRKRLLQIPLLERDGIFEAGSYFSKLEELPIIEFPLQSRNRLIAIEYADAIPVPSDFLAGPQSILFFEEVDVQGLHTLDKAFGLYFSEEEFFIGKYSLQE*