ggKbase home page

scnpilot_expt_750_bf_scaffold_28516_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 178..783

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchios similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 200.0
  • Bit_score: 161
  • Evalue 9.30e-37
DNA-directed RNA polymerase, subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 124.0
  • Bit_score: 92
  • Evalue 1.10e-16
DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3ZBW5_BRAFL similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 200.0
  • Bit_score: 161
  • Evalue 6.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Branchiostoma floridae → Branchiostoma → Chordata → Metazoa

Sequences

DNA sequence
Length: 606
ATGGATACGATTAATTACTATCCATCGGACACGACCATTAGCGGTCTTCAATTTACCAATTATACTTCTGAAGAAATTCGTCGTTTAAGCGTCAAAGAACTCACATCATCTCAGGCAATCGACCGTCTCGGTGCACCTGTTCCCGGTGGTCCCTACGATCTTTCATTGGGACCATTCGACAAAAACGACCGTTGCTTCACTTGTGGACAAGGTTTTGTCGCGTGTCCAGGTCATCTCGGTCATATATCTCTTGTTTTACCTGTCTACAATCCAGTTTTCTTTCGAAATCTTGTTAATCTCCTTCGTGGTTGTTGTCTTCATTGTCATACAATTCAATGTTCACATTCAGAAAAGTATTTATTCACCATGCAAATGCTCTATTTAAAACACGGGCAAACCAGTCAAATCGAACAGTTACAATCGATTTACAAGCGTTCTGTGTTAGAAAAGAAATCACTCGATGATTTCTATGAACTCATCGATGAACATATGAAAGCCAACCCACCGGCTGCAACAAAAATCGAAGCAACAACAAAGAATATTCTCGCTATGAGACAACAATTGATCAAAGATTTCGAATCACGAGCTTTTAAAACGAAAAGTTAG
PROTEIN sequence
Length: 202
MDTINYYPSDTTISGLQFTNYTSEEIRRLSVKELTSSQAIDRLGAPVPGGPYDLSLGPFDKNDRCFTCGQGFVACPGHLGHISLVLPVYNPVFFRNLVNLLRGCCLHCHTIQCSHSEKYLFTMQMLYLKHGQTSQIEQLQSIYKRSVLEKKSLDDFYELIDEHMKANPPAATKIEATTKNILAMRQQLIKDFESRAFKTKS*