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scnpilot_expt_750_bf_scaffold_310_4

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 5525..6076

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDF0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 171.0
  • Bit_score: 160
  • Evalue 2.30e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51924.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma l similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 171.0
  • Bit_score: 160
  • Evalue 3.20e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 182.0
  • Bit_score: 156
  • Evalue 7.20e-36

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
TTGAGGGAATTGACTGATACGGACCTGATGTTATCTGTGAAGGCGGGCGAGCTGGATAAACTAACCGGACTTTTTGACCGGTATCATCCTGCATTATACCAGTTTTTCTTTTATCATATCCGCCAGCAGCAAATGGCTGAAGACTGCACGCAGAATGTATTCTACCGCGTGTTGAAATATCGGCATAGCTATAAACCTCAAACATCCGTAAAGGCCTGGCTGTACAAGATAGCGCGTAATGTGTTGAAAGATGAATTGAAACAACAGCATAGGCATCGCTACGATCAGGACATTACCATACCGGGTGACAGGCAAAGCGCCGCCACAGCCGATGGTAAATTAAAAGAGAAAGAACAGTTGCGTTTATTGGAAGAAGCTCTCGGCCAGTTGGCGCCCGCAGACAGGGATATTCTTGTACTCAGCCGGTATCAGCAGCTTCGCTATCAAGAAATAGCAGAGATACTGCAACTGTCGGAAAGTGCCGTGAAAGTAAGGGTACACAGAGCTTTCAGGCAACTGCAATCATTTTACAGCAAAAAAGGAGTACTATGA
PROTEIN sequence
Length: 184
LRELTDTDLMLSVKAGELDKLTGLFDRYHPALYQFFFYHIRQQQMAEDCTQNVFYRVLKYRHSYKPQTSVKAWLYKIARNVLKDELKQQHRHRYDQDITIPGDRQSAATADGKLKEKEQLRLLEEALGQLAPADRDILVLSRYQQLRYQEIAEILQLSESAVKVRVHRAFRQLQSFYSKKGVL*