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scnpilot_expt_750_bf_scaffold_426_27

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 27686..28381

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037B9A65 similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 240.0
  • Bit_score: 243
  • Evalue 2.00e-61
Transcriptional regulatory protein YpdB {ECO:0000313|EMBL:KHJ37038.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 240.0
  • Bit_score: 241
  • Evalue 1.40e-60
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 241.0
  • Bit_score: 234
  • Evalue 2.60e-59

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 696
ATGATCAGATGTTTACTGGTAGATGATGAACCCTGGGCGCTCGAGCTGCTGACGAGTTATATTTCCCGTCTTCCTTCGCTTCAACTGGTGGCGGCAACTACAAAGCCGCTGGAGGCGCTGTCCCTGGCCGTGCCCGCGAAAACCGATCTGATCTTTCTCGATATCCAGATGCCGGAACTGAATGGACTGCAATTCATGCAGGCCATCGATCAGCGGTGTAAGGTAATCATTACCTCTGCTTACACGGAATACGCGGTTGCCGGCTTTGAAAACAACGTCACGGATTACCTATTGAAGCCGATTTCATTTGAACGTTTTTGCAAAGCAATTCAGAAAGCCGGCTCGCAGTTGGCTGCACCGGAACCGCCGCCGGTCGCTTCACATATTTTCGTGAAAACGGATAACAAACTCGTGAAAGTCGATTTTGAAGAAATCCTTTACCTCGAAGGTGCTAGAGATTACGTGTTCATTCATACCGTCAAGGACAAACTGGTGACATTGGACAGTCTGCGCAACTTTGAAGATATATTACCTTCGTCGCGCTTTGTGCGCATCCACAAATCCTTTATTGCCGGCATTGACAAAATCGATGCAGTCGAAAAAAGCCGGGTAGTAATCGGTGAAAACTTTTTACCTATCGGAGAAAGCCACAAACAGGCATTCCTGGCGGCCATTAATAAGAGCAGGGGGAGTTAG
PROTEIN sequence
Length: 232
MIRCLLVDDEPWALELLTSYISRLPSLQLVAATTKPLEALSLAVPAKTDLIFLDIQMPELNGLQFMQAIDQRCKVIITSAYTEYAVAGFENNVTDYLLKPISFERFCKAIQKAGSQLAAPEPPPVASHIFVKTDNKLVKVDFEEILYLEGARDYVFIHTVKDKLVTLDSLRNFEDILPSSRFVRIHKSFIAGIDKIDAVEKSRVVIGENFLPIGESHKQAFLAAINKSRGS*