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scnpilot_expt_750_bf_scaffold_1132_19

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(14204..15118)

Top 3 Functional Annotations

Value Algorithm Source
Putative Transcriptional regulator, LysR family n=3 Tax=Vibrio nigripulchritudo RepID=U4EHB8_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 288.0
  • Bit_score: 307
  • Evalue 1.90e-80
  • rbh
putative Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 288.0
  • Bit_score: 306
  • Evalue 9.30e-81
Putative Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCO60453.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio n similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 288.0
  • Bit_score: 306
  • Evalue 4.60e-80

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Taxonomy

Vibrio nigripulchritudo → Vibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGAAAATCCAGCATCTCCGCTTCCTGGCTGCAGTAGTGGAGTATGGCGGCGTGATCAAGGCGGCCGAGCGACTGCATCTTTCGCAGCCGTCCGTGTCGGCCGGCCTCAAGGCGCTGGAGCAGACGTTGGGCCGGCCGCTCTTCGACCGTTCCATCCCGGCCAACCGGCCGCTTCGGCTGACGCCGGCAGGACGCCGCTTCTATCGGCATGCGCGAGAGATCCTCCAGCAATGCGATGCAGCGCGTGCCGATTTTCTGGGCGAGGCCGAGGACCTACGACGGATTCGCGTGGGCGTGCTCAATACCCTGCCGCACGAGGCGATTGCCGCGCTGGTTCAAGCGGTGGCAAAGCAGGCGCCCAACGTGCGACTGGAGGTTTGGGAAGCTTCCGCCGAGCGTGTGGCCGGATGGCTCGCCCAGGCGCGGATCGACTTCGGCTGGACGAATGTCAGCGATCTCGCCGCCAACGCGCGCGTATTGTGGCGCGAACCCCTGGTCGCCGTGGTGGCGCCGGACCATCCGCTCGCACAGACGTCCGGGCCCATTTCGGTTCGGGATTTGGGGGCGCATCCGTTTGTACACCGATCGACTTGCGAGCTGGATGCGGTAGGCCGTGCGCAGTTGAAGGCCGCTGGCGTGACGCTGCGTGTGACGGTGCGTGCCGAACGTGAAGAACTTGTTTTCCGGCTGATACGAAACGGGAAGGGAATGACCCTGGCGCCGCGCAGCCTCGTGCCGGACGACCTGGTGGCCGTGCCGGTCTCGGGCTTGGGTGTGGCGAGAACCATCGGGCTTGAATGGCGCGAGGGCCTGGATCCGATGCTGCCTGGCCTGCTCGCCGATGCGATGGAGGATGTGGTGTCGCTGATGCCCGTGTCGGCGGAAACGGGGAGGCAATCGAAACGAGCCGGATAG
PROTEIN sequence
Length: 305
MKIQHLRFLAAVVEYGGVIKAAERLHLSQPSVSAGLKALEQTLGRPLFDRSIPANRPLRLTPAGRRFYRHAREILQQCDAARADFLGEAEDLRRIRVGVLNTLPHEAIAALVQAVAKQAPNVRLEVWEASAERVAGWLAQARIDFGWTNVSDLAANARVLWREPLVAVVAPDHPLAQTSGPISVRDLGAHPFVHRSTCELDAVGRAQLKAAGVTLRVTVRAEREELVFRLIRNGKGMTLAPRSLVPDDLVAVPVSGLGVARTIGLEWREGLDPMLPGLLADAMEDVVSLMPVSAETGRQSKRAG*