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scnpilot_expt_750_bf_scaffold_3406_3

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(1490..2020)

Top 3 Functional Annotations

Value Algorithm Source
succinyldiaminopimelate transaminase (EC:2.6.1.11); K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 166.0
  • Bit_score: 324
  • Evalue 9.50e-86
succinyldiaminopimelate transaminase (EC:2.6.1.11) similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 166.0
  • Bit_score: 285
  • Evalue 1.30e-74
succinyldiaminopimelate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036C9D4D similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 166.0
  • Bit_score: 322
  • Evalue 2.60e-85

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGAATCCGCGTCTCGATCAACTCCATCCCTACCCGTTCCAGAAACTGCGCGAGCTGTTCGCTGGCGTCACGCCGGATGCCGGGCTGTCGCCGATCAATCTGTCGATCGGCGAACCCAAGCATCCCACGCCCCAGTTCATCAAGGACGCGCTGGTCGCCGGACTCGGCGGGCTGGCGAATTATCCCATCACTCAAGGCTCGGATGCGCTGCGCGTTGCCATCTCTGCGTGGGCCGAACGGCGCTATGGGGTGAAACTCGACCCGGCGACCGAGGTGCTGCCGGTGAACGGCTCGCGCGAGGCGTTGTTCGCCTTCGCCCAGGCCGCCGTCGATTCGAGCCGCCACGGCCGCCGCACGGTCATCTCGCCCAACCCCTTCTACCAGATCTACGAAGGCGCCGCCCTGTTGGCCGGCGCCCGTCCCTTTTTCCTCAACACCCTGCCGGAAAACGGCTTCCGCATGGATTGGTCGCGCGGGAAACGGTCAGCCTGGTCTACGTGTGTTCGCCCGGCAACCCCACCGGCAAGGTGA
PROTEIN sequence
Length: 177
MNPRLDQLHPYPFQKLRELFAGVTPDAGLSPINLSIGEPKHPTPQFIKDALVAGLGGLANYPITQGSDALRVAISAWAERRYGVKLDPATEVLPVNGSREALFAFAQAAVDSSRHGRRTVISPNPFYQIYEGAALLAGARPFFLNTLPENGFRMDWSRGKRSAWSTCVRPATPPAR*