ggKbase home page

scnpilot_expt_750_bf_scaffold_8116_2

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(99..1556)

Top 3 Functional Annotations

Value Algorithm Source
cation transporter; K03498 trk system potassium uptake protein TrkH id=12494848 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 486.0
  • Bit_score: 869
  • Evalue 2.00e-249
cation transporter; K03498 trk system potassium uptake protein TrkH Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 484.0
  • Bit_score: 677
  • Evalue 1.20e-191
cation transporter similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 484.0
  • Bit_score: 624
  • Evalue 3.20e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_65_24 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGTCCCGCATTGCCCCCGTTCTGAATGTGTTGTCCAAGGTGGTGATGCTGTTCTCGGCCACCTTTCTGCTGCCGTTGACGCTGTCCTGGCTGGTGGCCGACGGGGCGCAGCGCGCCTACGATGATGCCATCATCGTCACGTTCGTCGCCGGGGCACTCACCTGGCTCTTTACCCGGAAATCGCAACGCGAGCTGCAGACTCGAGACGGCTTTCTGCTGGTGCTGCTGGCGTGGACCAGCCTGCCGGCCTTTGCCACCCTGCCGCTCCTGATCTACCTGCCTCATCTTTCGTTTACCGACGCCTATTTCGAAACGGTATCGGGCATCACCACGACGGGCGCGACGATCCTGACCGGCCTGGATGCCTTGCCCCTTTCCATCAATCTGTGGCGTGGCCTGCTGGTCTGGTTGGGCGGCATGGGCTTGATCGTACTGGCCGTTGCCATCCTGCCCCTGCTGGGCGTGGGGGGCATGCAGATCTACAAGGCCGAAACGCCGGGTCCGATGAAGGACACCAAGCTCACGCCGCGCATTACCGAAACAGCCAAGGGCCTGTATCTGGTCTATGTCGGTATTTCGATCGCGTGCGGGCTGTCGTACTGGGCGGCAGGGATGACGCCGTTCGATGCCGTCATGCACACGTTTTCCACCATGGGGCTGGGGGGATTTTCTTCGCACGATGCCGGTTTCAGCTACTGGAACTCGCCGGCCATCGAGGTGGTGGCGGTGGTGTTCATGCTGGTGGCCGGAATCAATTTCTCCACGCATTTCCTCGCATGGCGACACCGCTCGCTGGCGGCCTACCGGCTCGATCCCGAGGTGCGCTGGTTCCTGATCGCGACGCTGGGCAGCGCAGTGGTGATCGCGATCTACCTGACCGTCATGCACGTCTATCCCAGTTTTTTCCAGGCGCTGCGTTTCGCTGTTTTCAATACCGTCTCGATCGCCACGACGACCGGCTTTGCCAATACCGACTACAATAAATGGCCGATTTTCGCGCCGCTCTGTATGCTGCTTCTGTCCTCTTTTGCGTCCTGCTCGGGCAGTACCGGCGGCGGAATGAAAATGGTGCGCGCCCAGCTGCTATTCAGGCAGGGGCGGCGCGAACTGACCCGCCTCGTGCACCCGGCGGCCCGATTACCCGTCAAGCTGGCCGGACAGGTGGTGCCCAACAATGTGATCTACGCAGTGCTGGCGTTTGCATTTCTTTATGTGTTCGCCATCATTATCATGACGCTGTTGATGGCGCTCAGCGGGCTGGAGTTCATCAGCGCGTTCTCTGCCGTGGTGGCCTCGATCAACAATACCGGACCCGGGTTGAACCAGGTCGGGCCTGCCTCCACCTATGCAGGCTTGACCGATTTCCAGACCTGGATCTGTACGATTGCCATGTTGCTGGGACGTTTGGAGTTGCTTACCGTGCTTGTCGTCTTTACCCGGGCTTTCTGGCGTGCCTGA
PROTEIN sequence
Length: 486
MSRIAPVLNVLSKVVMLFSATFLLPLTLSWLVADGAQRAYDDAIIVTFVAGALTWLFTRKSQRELQTRDGFLLVLLAWTSLPAFATLPLLIYLPHLSFTDAYFETVSGITTTGATILTGLDALPLSINLWRGLLVWLGGMGLIVLAVAILPLLGVGGMQIYKAETPGPMKDTKLTPRITETAKGLYLVYVGISIACGLSYWAAGMTPFDAVMHTFSTMGLGGFSSHDAGFSYWNSPAIEVVAVVFMLVAGINFSTHFLAWRHRSLAAYRLDPEVRWFLIATLGSAVVIAIYLTVMHVYPSFFQALRFAVFNTVSIATTTGFANTDYNKWPIFAPLCMLLLSSFASCSGSTGGGMKMVRAQLLFRQGRRELTRLVHPAARLPVKLAGQVVPNNVIYAVLAFAFLYVFAIIIMTLLMALSGLEFISAFSAVVASINNTGPGLNQVGPASTYAGLTDFQTWICTIAMLLGRLELLTVLVVFTRAFWRA*